Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 2.4e-65 251.9 119 100.0
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 3.6e-61 238.0 119 96.6
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 3.6e-61 238.0 119 96.6
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 6.8e-60 233.8 119 95.0
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.2e-51 206.5 124 81.5
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 3.8e-50 201.4 124 78.2
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 1.4e-49 199.5 124 80.6
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 4.2e-49 198.0 124 79.0
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 3.3e-46 188.3 118 81.4
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 9.6e-46 186.8 124 71.8
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 1.6e-45 186.0 125 75.2
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.9e-42 175.3 125 68.0
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.9e-42 174.5 125 68.8
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.9e-42 174.5 125 68.8
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 8.4e-42 173.7 125 68.8
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 1.1e-41 173.3 125 67.2
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 1.1e-41 173.3 125 67.2
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.4e-41 172.9 126 68.3
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.4e-41 172.9 124 65.3
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 1.4e-41 172.9 124 64.5
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 2.4e-41 172.2 124 64.5
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 3.2e-41 171.8 125 68.8
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 3.2e-41 171.8 125 68.0
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 7.1e-41 170.6 125 66.4
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 7.1e-41 170.6 125 64.8
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 7.1e-41 170.6 125 64.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 1.2e-40 169.9 125 65.6
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.2e-40 169.9 125 67.2
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.2e-40 169.9 125 64.0
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.2e-40 169.9 125 65.6
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.2e-40 169.9 124 66.1
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.2e-40 169.9 124 66.1
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 1.2e-40 169.9 121 66.9
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 1.6e-40 169.5 126 66.7
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.1e-40 169.1 125 66.4
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.1e-40 169.1 125 66.4
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 2.7e-40 168.7 126 65.1
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 2.7e-40 168.7 124 63.7
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.7e-40 168.7 124 63.7
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.7e-40 168.7 124 63.7
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 2.7e-40 168.7 125 65.6
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 3.5e-40 168.3 125 66.4
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.5e-40 168.3 124 63.7
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.5e-40 168.3 124 63.7
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 3.5e-40 168.3 124 63.7
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.6e-40 167.9 125 64.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.9e-40 167.2 125 67.2
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 7.9e-40 167.2 125 63.2
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 1.0e-39 166.8 125 65.6
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.0e-39 166.8 124 63.7
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.0e-39 166.8 125 64.8
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.0e-39 166.8 125 64.8
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 1.0e-39 166.8 125 64.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.0e-39 166.8 125 64.0
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 1.3e-39 166.4 125 65.6
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.3e-39 166.4 124 65.3
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 1.8e-39 166.0 125 64.8
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 3.0e-39 165.2 125 65.6
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 5.1e-39 164.5 125 64.0
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 5.1e-39 164.5 75 100.0
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 5.1e-39 164.5 125 62.4
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.1e-39 164.5 124 62.9
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 6.7e-39 164.1 125 63.2
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 6.7e-39 164.1 125 63.2
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 6.7e-39 164.1 125 62.4
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 8.7e-39 163.7 125 62.4
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 8.7e-39 163.7 125 62.4
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 8.7e-39 163.7 132 62.1
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 8.7e-39 163.7 125 62.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 1.1e-38 163.3 124 62.1
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.1e-38 163.3 125 64.0
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.1e-38 163.3 125 64.0
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 3.3e-38 161.8 125 63.2
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 3.3e-38 161.8 124 62.9
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 4.3e-38 161.4 124 62.1
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 5.6e-38 161.0 124 60.5
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 5.6e-38 161.0 124 60.5
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 7.4e-38 160.6 125 61.6
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.3e-37 159.8 125 62.4
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.3e-37 159.8 125 64.0
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 1.6e-37 159.5 126 67.5
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 2.8e-37 158.7 125 60.8
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 2.8e-37 158.7 124 60.5
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 3.7e-37 158.3 124 59.7
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.7e-37 158.3 137 61.3
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 6.2e-37 157.5 72 100.0
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 6.2e-37 157.5 72 100.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.1e-36 156.8 125 62.4
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.4e-36 156.4 125 60.8
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 2.4e-36 155.6 124 59.7
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 2.4e-36 155.6 125 62.4
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 3.1e-36 155.2 125 60.0
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 5.3e-36 154.5 105 68.6
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 2.0e-35 152.5 171 49.1
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 2.6e-35 152.1 75 96.0
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 3.4e-35 151.8 126 59.5
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.5e-35 151.4 125 61.6
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 4.5e-35 151.4 149 52.3
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 4.5e-35 151.4 126 59.5
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 3.2e-33 145.2 125 58.4
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 5.5e-33 144.4 125 56.8
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.1e-32 142.5 122 56.6
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.1e-32 142.5 122 56.6
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 6.0e-32 141.0 122 54.1
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 6.0e-32 141.0 204 42.6
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 1.3e-31 139.8 102 66.7
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 1.8e-31 139.4 125 56.0
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 2.3e-31 139.0 125 56.0
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 5.1e-31 137.9 125 56.0
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.9e-30 136.0 118 56.8
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.3e-29 133.3 102 66.7
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.8e-28 129.4 102 64.7
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 4.1e-28 128.3 125 53.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.3e-28 127.9 102 64.7
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 5.5e-25 117.9 113 54.9
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 1.5e-22 109.8 80 63.8
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 1.5e-22 109.8 80 63.8
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 3.6e-16 88.6 68 69.1
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 1.8e-15 86.3 73 56.2
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.4e-12 76.6 67 58.2
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.5e-11 73.2 105 41.9
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 6.5e-10 67.8 47 63.8
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 6.5e-10 67.8 47 63.8
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 8.5e-10 67.4 47 63.8
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.2e-09 65.1 42 69.0
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 2.3e-07 59.3 45 64.4
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 3.0e-07 58.9 44 63.6
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 9.7e-06 53.9 48 58.3


User provided reference genes

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