Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p00010 Brassica napus HOM05D002930 ORTHO05D003283 1.1e-86 323.2 157 100.0
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 3.0e-15 85.9 148 44.6
CARHR143440 Cardamine hirsuta HOM05D002930 ORTHO05D003283 3.0e-15 85.9 148 44.6
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 6.8e-15 84.7 148 43.9
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 6.8e-15 84.7 148 44.6
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 8.9e-15 84.3 148 44.6
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.2e-14 84.0 148 43.2
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 1.5e-14 83.6 148 43.2
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 7.5e-14 81.3 148 44.6
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 7.5e-14 81.3 148 44.6
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 3.7e-13 79.0 148 43.2
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 4.9e-13 78.6 148 41.9
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 4.9e-13 78.6 148 41.9
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 4.9e-13 78.6 148 41.9
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 2.4e-12 76.3 148 41.2
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 2.4e-12 76.3 148 41.2
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 9.2e-12 74.3 148 39.9
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 2.9e-10 69.3 148 39.2
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 9.5e-09 64.3 146 36.3
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.2e-08 63.9 145 36.6
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 1.2e-08 63.9 145 28.3
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.6e-08 63.5 145 36.6
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 2.1e-08 63.2 148 33.1
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 6.1e-08 61.6 148 32.4
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 6.1e-08 61.6 143 32.2
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 8.0e-08 61.2 148 33.8
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 8.0e-08 61.2 147 32.0
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.0e-07 60.8 148 34.5
Gohir.A08G184980 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-07 60.5 145 35.9
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 1.8e-07 60.1 145 31.0
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 2.3e-07 59.7 148 35.1
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 3.0e-07 59.3 147 31.3
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 4.0e-07 58.9 148 33.8
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 4.0e-07 58.9 148 33.1
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 4.0e-07 58.9 148 32.4
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 5.2e-07 58.5 149 32.9
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 5.2e-07 58.5 148 31.1
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 5.2e-07 58.5 148 34.5
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 6.8e-07 58.2 147 29.9
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 8.9e-07 57.8 151 32.5
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 8.9e-07 57.8 148 33.1
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 1.2e-06 57.4 147 30.6
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.2e-06 57.4 147 30.6
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 1.2e-06 57.4 148 31.8
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 1.2e-06 57.4 146 30.1
Aqoxy211s003 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.5e-06 57.0 151 32.5
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.5e-06 57.0 151 32.5
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 1.5e-06 57.0 148 33.1
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 1.5e-06 57.0 148 33.8
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 2.0e-06 56.6 147 32.0
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 2.6e-06 56.2 146 31.5
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 2.6e-06 56.2 148 29.7
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 2.6e-06 56.2 151 31.8
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 3.4e-06 55.8 147 32.7
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 4.4e-06 55.5 148 32.4
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 4.4e-06 55.5 149 33.6
VMungo0720G1730 Vigna mungo HOM05D002930 ORTHO05D003283 4.4e-06 55.5 148 29.7
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 7.5e-06 54.7 148 31.8
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 9.8e-06 54.3 137 34.3
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 9.8e-06 54.3 149 30.9


User provided reference genes

Program Settings