Expansion plot
Gene family finder
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- VV13G02920
- Organism
- Vitis vinifera
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G38950 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 1894 Blast hits to 1417 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 1050; Fungi - 421; Plants - 287; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | 2 | + | View |
| AT5G04240 | EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein | 5 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00053G00920 | No description available. | supercontig_53 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA11G02060 | CC_gene:KDM5B,CC_gene:KDM5D,CC_gene:lid,CC_gene:Kdm5a,CC_gene:KDM5A,CC_functional_completeness:modules,PRODUCT:Putative ZOS1-20 - C2H2 zinc finger protein%2C expressed,GO:0008270,GO:0005622,GO:0003676,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr11 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G22470 | No description available. | Chr10 | + | View |