Anchorpoints

Gene id
VV10G04600
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G30210'TEOSINTE BRANCHED 1, cycloidea, and PCF family 24' (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 TCP family protein involved in heterochronic regulation of leaf differentiation.1-View
AT4G18390'TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2' (TCP2); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 24-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G06460No description available.Bd1-View
BD4G01547No description available.Bd4-View
BD1G58450No description available.Bd1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA04G32450CC_gene:PCF8,CC_gene:TCP5,CC_gene:TCP13,CC_gene:TCP24,CC_gene:TCP2,CC_gene:PCF6,CC_functional_completeness:complete,PRODUCT:Putative Transcription factor PCF6,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4-View
MA07G01180CC_gene:PCF8,CC_gene:TCP5,CC_gene:TCP13,CC_gene:TCP24,CC_gene:TCP2,CC_gene:PCF6,CC_functional_completeness:complete,PRODUCT:Putative Transcription factor PCF6,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7+View
MA04G23600CC_gene:PCF8,CC_gene:TCP5,CC_gene:TCP13,CC_gene:TCP24,CC_gene:TCP2,CC_gene:PCF6,CC_functional_completeness:complete,PRODUCT:Putative Transcription factor PCF6,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G57190Transcription factor PCF6 TCP family transcription factor, putative, expressed3+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_07G04360No description available.Chr07+View
OSINDICA_12G30330Transcription factor PCF8Chr12+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G08310No description available.Chr11-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G006020No description available.chr_1-View
SB02G003070No description available.chr_2+View
SB08G021690No description available.chr_8+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G06320No description available.scaffold_9-View
SI003G40350No description available.scaffold_3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G048370Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch08-View


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Gene id
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Description
Chromosome
Strand