Anchorpoints

Gene id
VV02G07900
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV15G08970name=GSVIVG01027625001;chr15-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G12050Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G22810.1); Has 6654 Blast hits to 4300 proteins in 274 species: Archae - 0; Bacteria - 187; Metazoa - 2435; Fungi - 660; Plants - 926; Viruses - 16; Other Eukaryotes - 2430 (source: NCBI BLink). Predicted AT-hook DNA-binding family protein4-View
AT2G45430AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis. AT-hook motif nuclear-localized protein 222+View
AT4G22810Predicted AT-hook DNA-binding family protein Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G12050.1); Has 813 Blast hits to 808 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 2; Plants - 764; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink).4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G51520No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00029G00620No description available.supercontig_29-View
CP00018G01190No description available.supercontig_18+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G08580CC_gene:SEC16,CC_gene:glmU,CC_gene:ESC,CC_functional_completeness:complete,PRODUCT:DNA binding protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G04540DNA binding protein, putative, expressed6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G07080No description available.Chr14+View
PT02G14930No description available.Chr02+View
PT03G11690No description available.Chr03+View
PT01G11520No description available.Chr01-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G002490No description available.chr_10-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G007560AT-hook DNA-binding protein (Fragment) (AHRD V1 *--* A1DR81_CATRO)%3B contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-bindingch08+View
SL01G091470AT-hook DNA-binding protein (Fragment) (AHRD V1 *--* A1DR81_CATRO)%3B contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-bindingch01+View
SL08G079720AT-hook DNA-binding protein (Fragment) (AHRD V1 *--* A1DR81_CATRO)%3B contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-bindingch08-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G05360No description available.9+View


Download

Gene id
Species
Description
Chromosome
Strand