Anchorpoints

Gene id
SB01G039890
Organism
Sorghum bicolor

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G29380highly ABA-induced PP2C gene 3 (HAI3); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6960 Blast hits to 6933 proteins in 604 species: Archae - 4; Bacteria - 618; Metazoa - 1585; Fungi - 779; Plants - 2700; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). highly ABA-induced PP2C gene 32+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G66920No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G02680No description available.supercontig_19-View
CP00081G00920No description available.supercontig_81-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA11G24740CC_gene:At5g59220,CC_gene:Os05g0457200,CC_gene:Os03g0268600,CC_gene:Os09g0325700,CC_gene:PP2CA,CC_gene:Os01g0846300,CC_gene:At2g29380,CC_gene:AIP1,CC_functional_completeness:complete,PRODUCT:protein phosphatase 2C%2C putative%2C expressed,GO:0008287,GO:0006470,GO:0004722,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.1.3.16chr11-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G16170Probable protein phosphatase 2C 30 protein phosphatase 2C, putative, expressed3-View
OS05G38290protein phosphatase 2C, putative, expressed5-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G14550No description available.Chr03-View
OSINDICA_01G59460No description available.Chr01+View
OSINDICA_05G34090No description available.Chr05-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G05920No description available.Chr08+View
PT10G19960No description available.Chr10-View
PT01G24520No description available.Chr01+View
PT09G03730No description available.Chr09+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G47400No description available.scaffold_9-View
SI003G22200No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076400Protein phosphatase 2C (AHRD V1 **** Q8RVG0_TOBAC)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2Cch06+View
SL05G052980Protein phosphatase 2C (AHRD V1 ***- Q8RVG0_TOBAC)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2Cch05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G04810name=GSVIVG01016485001;chr13+View
VV06G02830name=GSVIVG01024875001;chr6+View


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Gene id
Species
Description
Chromosome
Strand