Anchorpoints

Gene id
PT02G08140
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT07G09920No description available.Chr07+View
PT05G17990No description available.Chr05+View
PT05G06960No description available.Chr05-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G44130Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, embryo, pedicel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G77480.2); Has 1835 Blast hits to 1829 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 37; Plants - 1697; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). Eukaryotic aspartyl protease family protein1-View
AT1G77480Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1752 Blast hits to 1744 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1631; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00064G01030No description available.supercontig_64+View
CP00037G00260No description available.supercontig_37+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G060130Nucellin-like aspartic protease (Fragment) (AHRD V1 **-- Q8L886_MAIZE)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch06+View
SL04G056590Aspartyl protease family protein (AHRD V1 **-- D7KF83_ARALY)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G07390name=GSVIVG01022355001;chr7-View
VV18G01930name=GSVIVG01008844001;chr18-View


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Gene id
Species
Description
Chromosome
Strand