Gene: PT02G08140 (Populus trichocarpa)
Overview 
- Gene Identifier
- PT02G08140
- Transcript Identifier
- PT02G08140.1
- Gene Type
- Coding gene
- Location
- Chr02 : 5668354-5671156 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
Aspartic proteinase Asp1
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Potri.002G081400.1 |
id | PAC:27024229 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006508 | IEA | Genome Project | proteolysis | |
GO:0008152 | IEA | PLAZA Homology | metabolic process | HOM03M000031 |
GO:0071704 | IEA | PLAZA Homology | organic substance metabolic process | HOM03M000031 |
GO:0043170 | IEA | PLAZA Homology | macromolecule metabolic process | HOM03M000031 |
GO:0019538 | IEA | PLAZA Homology | protein metabolic process | HOM03M000031 |
GO:0044238 | IEA | PLAZA Homology | primary metabolic process | HOM03M000031 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0004190 | IEA | Genome Project | aspartic-type endopeptidase activity | |
GO:0070011 | IEA | PLAZA Homology | peptidase activity, acting on L-amino acid peptides | HOM03M000031 |
GO:0004175 | IEA | PLAZA Homology | endopeptidase activity | HOM03M000031 |
GO:0016787 | IEA | PLAZA Homology | hydrolase activity | HOM03M000031 |
GO:0070001 | IEA | PLAZA Homology | aspartic-type peptidase activity | HOM03M000031 |
GO:0008233 | IEA | PLAZA Homology | peptidase activity | HOM03M000031 |
GO:0003824 | IEA | PLAZA Homology | catalytic activity | HOM03M000031 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.4 | protein.degradation.aspartate protease |
No SignalP domains detected for this gene.