Anchorpoints

Gene id
AT5G40330
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G27785putative transcription factor (MYB118) myb domain protein 118 myb domain protein 118 (MYB118); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: rosette leaf, embryo, fruit, cauline leaf, flower; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 115 (TAIR:AT5G40360.1); Has 9843 Blast hits to 8432 proteins in 561 species: Archae - 0; Bacteria - 0; Metazoa - 1160; Fungi - 755; Plants - 5742; Viruses - 7; Other Eukaryotes - 2179 (source: NCBI BLink).3-View
AT5G14750Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC). myb domain protein 66 myb domain protein 66 (MYB66); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 23 (TAIR:AT5G40330.1); Has 9181 Blast hits to 8410 proteins in 556 species: Archae - 0; Bacteria - 0; Metazoa - 822; Fungi - 534; Plants - 5944; Viruses - 3; Other Eukaryotes - 1878 (source: NCBI BLink).5-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00108G00270No description available.supercontig_108+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G34720No description available.Chr01+View
PT15G07560No description available.Chr15+View
PT12G08040No description available.Chr12+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G071520Myb family transcription factor (AHRD V1 *-*- D7M9F3_ARALY)%3B contains Interpro domain(s) IPR015495 Myb transcription factorch06+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G01690name=GSVIVG01007740001;chr17-View


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Gene id
Species
Description
Chromosome
Strand