Anchorpoints

Gene id
AT4G21750
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G04890protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression. protodermal factor 24-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00198G00180No description available.supercontig_198+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G02040No description available.Chr04-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G005830Homeobox-leucine zipper protein ATHB-15 (AHRD V1 ***- ATB15_ARATH)%3B contains Interpro domain(s) IPR002913 Lipid-binding STARTch12+View
SL03G031760Homeobox-leucine zipper protein ATHB-14 (AHRD V1 *-*- ATB14_ARATH)%3B contains Interpro domain(s) IPR002913 Lipid-binding STARTch03-View
SL02G080260Homeobox leucine-zipper protein (AHRD V1 ***- Q8H962_ZINEL)%3B contains Interpro domain(s) IPR002913 Lipid-binding STARTch02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G00420name=GSVIVG01012643001;chr10+View


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Gene id
Species
Description
Chromosome
Strand