Functional clusters
Information
- Type
- Mapman term
- Identifier
- 29.5.4
- Description
- protein.degradation.aspartate protease
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 3 | 17 | CH_ath_156 | 4 | 4 | 0.0000000640672 |
Brachypodium distachyon | Bd2 | 17 | CH_bdi_182 | 3 | 3 | 0.0000423062 |
Oryza sativa ssp. japonica | 1 | 17 | CH_osa_35 | 8 | 12 | 0.00000000000000328397 |
Oryza sativa ssp. japonica | 10 | 17 | CH_osa_15 | 10 | 13 | 5.68476e-21 |
Oryza sativa ssp. japonica | 11 | 17 | CH_osa_366 | 4 | 11 | 0.000215681 |
Oryza sativa ssp. japonica | 3 | 17 | CH_osa_156 | 5 | 9 | 0.000000149694 |
Oryza sativa ssp. japonica | 5 | 17 | CH_osa_179 | 4 | 4 | 0.000000660325 |
Oryza sativa ssp. japonica | 7 | 17 | CH_osa_88 | 6 | 10 | 0.000000000447089 |
Oryza sativa ssp. japonica | 10 | 18 | CH_osa_17 | 10 | 13 | 5.68476e-21 |
Populus trichocarpa | Chr19 | 17 | CH_ptr_66 | 7 | 10 | 0.0000000000000170124 |
Solanum lycopersicum | ch01 | 17 | CH_sly_7 | 12 | 13 | 2.41231e-29 |
Solanum lycopersicum | ch01 | 17 | CH_sly_358 | 4 | 13 | 0.000128223 |
Solanum lycopersicum | ch06 | 17 | CH_sly_434 | 3 | 4 | 0.000493083 |
Solanum lycopersicum | ch08 | 17 | CH_sly_357 | 3 | 3 | 0.00012341 |
Solanum lycopersicum | ch01 | 18 | CH_sly_7 | 12 | 13 | 2.41231e-29 |
Solanum lycopersicum | ch06 | 19 | CH_sly_26 | 3 | 4 | 0.000167759 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |