Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a MapMan term
All gene family content is shown and individual cells refer to the target genes (per species).
MapMan term
Description MapMan term
secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase
#associated genes175
#associated gene families6
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03D000741 | 188 | 126 | 31 | 10 | 12 | 4 | 15 | 2 | 4 | 4 | 4 | 1 | 7 | 10 | 5 | 6 | 10 | 13 | 3 | 10 | 6 | 3 | 1 | 4 | 2 | 4 | 7 | 4 | 7 | 7 | 6 | 9 | 3 | 5 |
| HOM03D001572 | 103 | 44 | 31 | 4 | 3 | 2 | 4 | 2 | 2 | 2 | 3 | 2 | 3 | 3 | 4 | 2 | 6 | 6 | 1 | 7 | 2 | 2 | 2 | 4 | 5 | 2 | 7 | 3 | 2 | 1 | 4 | 3 | 5 | 5 |
| HOM03D002176 | 79 | 1 | 30 | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 8 | 3 | 0 | 4 | 4 | 3 | 1 | 3 | 1 | 2 | 4 | 2 | 2 | 2 | 2 | 2 | 6 | 3 |
| HOM03D003332 | 54 | 1 | 29 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 1 | 0 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 4 | 2 | 1 | 0 | 2 | 1 | 2 | 2 | 2 | 2 | 4 | 1 | 2 | 3 | 2 |
| HOM03D006152 | 35 | 1 | 29 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 1 |
| HOM03D115284 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".