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WorkbenchGene families associated with InterPro domain IPR016059
All gene family content
is shown and individual cells refer to the target genes (per species).
- InterPro domain
- IPR016059
- InterPro domain description
- DNA ligase, ATP-dependent, conserved site
- #associated genes
- 152
- #associated gene families
- 5
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03D001767 | 94 | 63 | 31 | 2 | 3 | 5 | 3 | 4 | 4 | 3 | 7 | 2 | 2 | 2 | 2 | 4 | 5 | 3 | 2 | 8 | 2 | 5 | 1 | 2 | 1 | 2 | 3 | 3 | 2 | 3 | 2 | 1 | 2 | 4 |
| HOM03D004481 | 44 | 28 | 30 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 5 | 1 | 1 | 1 | 2 |
| HOM03D000010 | 3179 | 1 | 29 | 2 | 2 | 0 | 2 | 129 | 21 | 41 | 30 | 1 | 2 | 236 | 127 | 88 | 141 | 110 | 19 | 501 | 129 | 326 | 0 | 224 | 8 | 123 | 213 | 72 | 88 | 168 | 147 | 2 | 168 | 59 |
| HOM03D001780 | 93 | 1 | 28 | 4 | 4 | 2 | 4 | 2 | 3 | 3 | 1 | 0 | 3 | 3 | 2 | 2 | 10 | 4 | 1 | 6 | 4 | 3 | 0 | 3 | 0 | 2 | 4 | 2 | 3 | 3 | 2 | 3 | 2 | 8 |
| HOM03D130586 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
- #genes (in total)
- This is the number of genes in the entire gene family.
- #associated genes
- This is the number of genes that are part of the gene family, and also have the specified InterPro domain. Naturaly, this number should be a subset of "#genes (in total)".