GO |
description |
genes |
species |
aly |
ath |
atr |
bra |
bvu |
cla |
cme |
cpa |
cre |
cru |
csi |
egr |
fve |
gma |
gra |
lja |
mdo |
mes |
mtr |
olu |
osa |
ppa |
ppe |
ptr |
rco |
sly |
stu |
tca |
tpa |
vvi |
zma |
GO:0032774 |
RNA biosynthetic process |
59682 |
31 |
2181 |
3070 |
1086 |
3122 |
1483 |
1454 |
1476 |
1900 |
365 |
2055 |
1548 |
1773 |
1617 |
3856 |
2837 |
1003 |
3344 |
2122 |
2286 |
312 |
1786 |
1426 |
1645 |
2627 |
1926 |
2322 |
2025 |
1573 |
1831 |
1449 |
2182 |
GO:0006351 |
transcription, DNA-templated |
59580 |
31 |
2174 |
3065 |
1084 |
3118 |
1481 |
1452 |
1474 |
1898 |
362 |
2052 |
1545 |
1770 |
1615 |
3849 |
2835 |
1002 |
3337 |
2118 |
2282 |
308 |
1784 |
1423 |
1643 |
2624 |
1922 |
2316 |
2021 |
1571 |
1829 |
1447 |
2179 |
GO:0051252 |
regulation of RNA metabolic process |
55035 |
31 |
2025 |
2765 |
973 |
2936 |
1344 |
1354 |
1357 |
1782 |
309 |
1929 |
1433 |
1651 |
1471 |
3606 |
2623 |
918 |
3086 |
1974 |
2092 |
257 |
1642 |
1272 |
1525 |
2443 |
1820 |
2125 |
1858 |
1444 |
1716 |
1308 |
1997 |
GO:2001141 |
regulation of RNA biosynthetic process |
54585 |
31 |
2010 |
2750 |
963 |
2911 |
1331 |
1342 |
1346 |
1770 |
302 |
1914 |
1423 |
1639 |
1458 |
3579 |
2604 |
911 |
3051 |
1960 |
2074 |
254 |
1628 |
1260 |
1514 |
2420 |
1808 |
2112 |
1843 |
1431 |
1701 |
1296 |
1980 |
GO:0006355 |
regulation of transcription, DNA-dependent |
54539 |
31 |
2006 |
2748 |
963 |
2908 |
1331 |
1342 |
1346 |
1759 |
301 |
1913 |
1411 |
1639 |
1457 |
3579 |
2604 |
911 |
3048 |
1959 |
2074 |
254 |
1628 |
1259 |
1514 |
2417 |
1808 |
2112 |
1843 |
1431 |
1699 |
1295 |
1980 |
GO:0006396 |
RNA processing |
14546 |
31 |
468 |
1104 |
370 |
540 |
480 |
354 |
370 |
412 |
267 |
423 |
359 |
445 |
434 |
755 |
517 |
250 |
875 |
415 |
511 |
279 |
429 |
404 |
407 |
574 |
379 |
577 |
501 |
377 |
378 |
391 |
501 |
GO:0034660 |
ncRNA metabolic process |
7899 |
31 |
268 |
531 |
200 |
293 |
232 |
180 |
197 |
244 |
187 |
247 |
187 |
228 |
237 |
409 |
310 |
131 |
556 |
204 |
269 |
191 |
238 |
228 |
198 |
308 |
224 |
279 |
247 |
206 |
187 |
234 |
249 |
GO:0016071 |
mRNA metabolic process |
5350 |
31 |
171 |
490 |
137 |
220 |
182 |
130 |
132 |
141 |
89 |
157 |
129 |
162 |
155 |
285 |
195 |
79 |
303 |
157 |
177 |
89 |
157 |
168 |
140 |
212 |
133 |
183 |
177 |
132 |
145 |
147 |
176 |
GO:0006399 |
tRNA metabolic process |
5130 |
31 |
188 |
175 |
127 |
205 |
140 |
115 |
125 |
156 |
112 |
161 |
122 |
157 |
165 |
273 |
219 |
86 |
388 |
134 |
195 |
137 |
150 |
159 |
125 |
201 |
155 |
195 |
174 |
140 |
126 |
159 |
166 |
GO:0034470 |
ncRNA processing |
5128 |
31 |
147 |
430 |
125 |
173 |
155 |
123 |
134 |
152 |
121 |
154 |
119 |
153 |
131 |
269 |
195 |
87 |
327 |
131 |
166 |
134 |
152 |
143 |
126 |
205 |
134 |
209 |
178 |
136 |
122 |
143 |
154 |
GO:0051254 |
positive regulation of RNA metabolic process |
5070 |
31 |
191 |
513 |
102 |
267 |
128 |
131 |
133 |
124 |
27 |
191 |
129 |
165 |
135 |
306 |
241 |
94 |
263 |
197 |
151 |
24 |
101 |
91 |
135 |
226 |
133 |
155 |
147 |
145 |
186 |
118 |
121 |
GO:0045893 |
positive regulation of transcription, DNA-dependent |
5051 |
31 |
190 |
513 |
102 |
267 |
124 |
131 |
133 |
122 |
27 |
190 |
128 |
165 |
135 |
305 |
240 |
94 |
263 |
197 |
151 |
24 |
101 |
90 |
134 |
225 |
132 |
152 |
147 |
144 |
186 |
118 |
121 |
GO:0051253 |
negative regulation of RNA metabolic process |
4709 |
31 |
178 |
428 |
98 |
234 |
121 |
122 |
122 |
113 |
40 |
165 |
128 |
129 |
123 |
285 |
205 |
99 |
216 |
160 |
160 |
33 |
125 |
123 |
128 |
179 |
129 |
155 |
150 |
129 |
158 |
130 |
144 |
GO:0045892 |
negative regulation of transcription, DNA-dependent |
4708 |
31 |
178 |
428 |
98 |
234 |
121 |
122 |
122 |
113 |
39 |
165 |
128 |
129 |
123 |
285 |
205 |
99 |
216 |
160 |
160 |
33 |
125 |
123 |
128 |
179 |
129 |
155 |
150 |
129 |
158 |
130 |
144 |
GO:0006397 |
mRNA processing |
4279 |
31 |
139 |
279 |
117 |
176 |
153 |
104 |
108 |
117 |
72 |
132 |
107 |
139 |
128 |
233 |
159 |
67 |
244 |
129 |
149 |
71 |
130 |
142 |
114 |
177 |
110 |
150 |
143 |
109 |
116 |
119 |
146 |
GO:0009451 |
RNA modification |
3449 |
31 |
111 |
462 |
76 |
121 |
99 |
88 |
88 |
100 |
72 |
113 |
79 |
100 |
88 |
177 |
115 |
45 |
207 |
94 |
101 |
79 |
94 |
80 |
83 |
128 |
88 |
85 |
94 |
96 |
97 |
92 |
97 |
GO:0008380 |
RNA splicing |
3320 |
31 |
113 |
345 |
84 |
122 |
104 |
82 |
86 |
89 |
52 |
95 |
82 |
94 |
91 |
164 |
118 |
58 |
185 |
98 |
121 |
33 |
99 |
90 |
93 |
135 |
89 |
105 |
102 |
84 |
92 |
82 |
133 |
GO:0008033 |
tRNA processing |
2787 |
31 |
85 |
80 |
65 |
100 |
79 |
67 |
73 |
73 |
67 |
86 |
66 |
92 |
70 |
164 |
124 |
50 |
177 |
72 |
106 |
85 |
83 |
85 |
64 |
119 |
78 |
137 |
116 |
84 |
72 |
80 |
88 |
GO:0016072 |
rRNA metabolic process |
2445 |
31 |
69 |
358 |
62 |
80 |
79 |
58 |
62 |
77 |
68 |
72 |
52 |
62 |
64 |
119 |
69 |
39 |
156 |
55 |
61 |
50 |
75 |
61 |
63 |
87 |
59 |
73 |
67 |
56 |
54 |
64 |
74 |
GO:0043039 |
tRNA aminoacylation |
2324 |
31 |
103 |
67 |
62 |
105 |
61 |
48 |
52 |
83 |
44 |
75 |
56 |
66 |
95 |
110 |
95 |
36 |
212 |
62 |
91 |
53 |
66 |
71 |
61 |
81 |
80 |
58 |
60 |
56 |
54 |
86 |
75 |
GO:0006418 |
tRNA aminoacylation for protein translation |
2319 |
31 |
103 |
67 |
62 |
105 |
61 |
48 |
52 |
83 |
44 |
75 |
56 |
66 |
94 |
107 |
95 |
36 |
212 |
62 |
91 |
53 |
66 |
70 |
61 |
81 |
80 |
58 |
60 |
56 |
54 |
86 |
75 |
GO:0006364 |
rRNA processing |
2259 |
31 |
60 |
351 |
56 |
72 |
72 |
54 |
58 |
74 |
52 |
65 |
47 |
57 |
60 |
108 |
63 |
35 |
149 |
50 |
55 |
49 |
65 |
58 |
59 |
80 |
53 |
68 |
62 |
51 |
49 |
59 |
68 |
GO:0000375 |
RNA splicing, via transesterification reactions |
2084 |
31 |
73 |
150 |
61 |
82 |
59 |
54 |
59 |
58 |
30 |
62 |
54 |
61 |
60 |
112 |
72 |
31 |
119 |
68 |
78 |
20 |
60 |
61 |
65 |
93 |
58 |
74 |
70 |
57 |
60 |
54 |
69 |
GO:0000377 |
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile |
2084 |
31 |
73 |
150 |
61 |
82 |
59 |
54 |
59 |
58 |
30 |
62 |
54 |
61 |
60 |
112 |
72 |
31 |
119 |
68 |
78 |
20 |
60 |
61 |
65 |
93 |
58 |
74 |
70 |
57 |
60 |
54 |
69 |
GO:0006352 |
DNA-dependent transcription, initiation |
1819 |
31 |
60 |
57 |
46 |
80 |
50 |
41 |
47 |
51 |
19 |
58 |
43 |
44 |
76 |
122 |
84 |
35 |
111 |
58 |
77 |
25 |
55 |
51 |
46 |
79 |
63 |
53 |
59 |
52 |
48 |
49 |
80 |
GO:0000398 |
mRNA splicing, via spliceosome |
1786 |
31 |
62 |
139 |
50 |
73 |
49 |
43 |
49 |
47 |
30 |
53 |
44 |
48 |
50 |
94 |
62 |
28 |
107 |
59 |
66 |
20 |
51 |
56 |
54 |
82 |
49 |
64 |
59 |
46 |
49 |
44 |
59 |
GO:0006366 |
transcription from RNA polymerase II promoter |
1724 |
31 |
57 |
91 |
45 |
71 |
46 |
43 |
47 |
59 |
25 |
52 |
44 |
47 |
57 |
100 |
67 |
29 |
90 |
49 |
57 |
26 |
52 |
76 |
56 |
69 |
49 |
65 |
56 |
47 |
41 |
43 |
68 |
GO:0031050 |
dsRNA fragmentation |
1445 |
31 |
39 |
150 |
43 |
47 |
44 |
33 |
38 |
33 |
13 |
39 |
44 |
45 |
52 |
81 |
51 |
35 |
57 |
46 |
49 |
9 |
49 |
36 |
43 |
55 |
39 |
52 |
59 |
36 |
36 |
43 |
49 |
GO:0070918 |
production of small RNA involved in gene silencing by RNA |
1445 |
31 |
39 |
150 |
43 |
47 |
44 |
33 |
38 |
33 |
13 |
39 |
44 |
45 |
52 |
81 |
51 |
35 |
57 |
46 |
49 |
9 |
49 |
36 |
43 |
55 |
39 |
52 |
59 |
36 |
36 |
43 |
49 |
GO:0006342 |
chromatin silencing |
1349 |
31 |
34 |
254 |
26 |
44 |
40 |
30 |
29 |
26 |
10 |
34 |
37 |
37 |
37 |
81 |
51 |
32 |
54 |
37 |
54 |
6 |
33 |
41 |
34 |
36 |
32 |
45 |
40 |
33 |
36 |
32 |
34 |
GO:0006401 |
RNA catabolic process |
1182 |
31 |
36 |
136 |
27 |
52 |
34 |
28 |
29 |
27 |
35 |
35 |
29 |
27 |
27 |
63 |
48 |
17 |
57 |
33 |
33 |
19 |
41 |
36 |
30 |
46 |
28 |
37 |
36 |
29 |
36 |
32 |
39 |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
1083 |
31 |
35 |
35 |
29 |
40 |
27 |
28 |
29 |
41 |
15 |
33 |
28 |
30 |
33 |
57 |
41 |
18 |
64 |
33 |
36 |
13 |
31 |
53 |
40 |
42 |
30 |
49 |
41 |
30 |
27 |
29 |
46 |
GO:0030422 |
production of siRNA involved in RNA interference |
1082 |
31 |
29 |
143 |
32 |
35 |
31 |
26 |
29 |
26 |
9 |
29 |
34 |
35 |
37 |
54 |
37 |
24 |
42 |
30 |
30 |
6 |
41 |
27 |
33 |
39 |
28 |
34 |
35 |
26 |
29 |
33 |
39 |
GO:0006400 |
tRNA modification |
1041 |
31 |
33 |
29 |
27 |
36 |
34 |
29 |
33 |
32 |
29 |
29 |
27 |
30 |
27 |
68 |
48 |
17 |
73 |
30 |
33 |
35 |
31 |
30 |
27 |
45 |
31 |
28 |
34 |
35 |
26 |
27 |
28 |
GO:0031123 |
RNA 3'-end processing |
989 |
31 |
29 |
34 |
22 |
47 |
27 |
25 |
24 |
29 |
23 |
30 |
27 |
30 |
35 |
53 |
44 |
18 |
71 |
31 |
32 |
17 |
36 |
25 |
26 |
37 |
23 |
36 |
35 |
30 |
32 |
28 |
33 |
GO:0006402 |
mRNA catabolic process |
869 |
31 |
20 |
121 |
18 |
39 |
23 |
21 |
22 |
21 |
17 |
21 |
21 |
18 |
20 |
48 |
35 |
10 |
45 |
24 |
23 |
16 |
26 |
30 |
22 |
34 |
20 |
29 |
28 |
20 |
24 |
24 |
29 |
GO:0001522 |
pseudouridine synthesis |
835 |
31 |
27 |
25 |
21 |
32 |
29 |
24 |
27 |
27 |
26 |
22 |
24 |
33 |
23 |
37 |
24 |
13 |
44 |
26 |
30 |
29 |
26 |
28 |
24 |
32 |
28 |
23 |
24 |
25 |
25 |
22 |
35 |
GO:0001510 |
RNA methylation |
826 |
31 |
19 |
196 |
19 |
23 |
18 |
15 |
16 |
26 |
16 |
22 |
14 |
19 |
22 |
39 |
30 |
10 |
45 |
17 |
22 |
13 |
24 |
21 |
17 |
25 |
17 |
19 |
19 |
19 |
20 |
23 |
21 |
GO:0000956 |
nuclear-transcribed mRNA catabolic process |
787 |
31 |
18 |
119 |
16 |
34 |
20 |
18 |
19 |
17 |
16 |
19 |
19 |
16 |
18 |
44 |
33 |
9 |
38 |
22 |
21 |
14 |
24 |
27 |
19 |
31 |
18 |
26 |
25 |
18 |
20 |
22 |
27 |
GO:0035196 |
production of miRNAs involved in gene silencing by miRNA |
770 |
31 |
19 |
136 |
23 |
24 |
21 |
16 |
22 |
17 |
7 |
21 |
20 |
24 |
23 |
40 |
24 |
16 |
26 |
22 |
21 |
5 |
26 |
15 |
19 |
31 |
20 |
24 |
24 |
16 |
17 |
21 |
30 |
GO:0010267 |
production of ta-siRNAs involved in RNA interference |
640 |
31 |
15 |
111 |
21 |
17 |
18 |
15 |
16 |
14 |
6 |
16 |
20 |
20 |
21 |
33 |
22 |
13 |
23 |
15 |
16 |
3 |
25 |
11 |
18 |
25 |
15 |
20 |
21 |
14 |
14 |
19 |
23 |
GO:0000394 |
RNA splicing, via endonucleolytic cleavage and ligation |
475 |
31 |
14 |
144 |
7 |
12 |
10 |
7 |
9 |
9 |
11 |
10 |
7 |
13 |
11 |
18 |
19 |
10 |
25 |
8 |
14 |
6 |
9 |
8 |
8 |
14 |
12 |
11 |
9 |
7 |
10 |
8 |
15 |
GO:0006367 |
transcription initiation from RNA polymerase II promoter |
475 |
31 |
18 |
15 |
13 |
25 |
14 |
11 |
14 |
14 |
7 |
16 |
11 |
13 |
19 |
34 |
20 |
9 |
20 |
13 |
18 |
9 |
17 |
18 |
12 |
23 |
16 |
11 |
11 |
14 |
11 |
11 |
18 |
GO:0006354 |
DNA-dependent transcription, elongation |
471 |
31 |
12 |
132 |
10 |
9 |
12 |
6 |
11 |
11 |
8 |
7 |
9 |
8 |
11 |
15 |
23 |
7 |
19 |
9 |
13 |
8 |
14 |
12 |
6 |
16 |
11 |
16 |
14 |
11 |
6 |
11 |
14 |
GO:0031048 |
chromatin silencing by small RNA |
471 |
30 |
10 |
119 |
11 |
11 |
14 |
7 |
8 |
8 |
4 |
9 |
11 |
11 |
13 |
28 |
15 |
14 |
20 |
14 |
19 |
0 |
11 |
14 |
9 |
10 |
8 |
17 |
17 |
10 |
10 |
9 |
10 |
GO:0043631 |
RNA polyadenylation |
467 |
31 |
12 |
14 |
9 |
21 |
14 |
11 |
11 |
15 |
6 |
11 |
13 |
10 |
17 |
29 |
19 |
12 |
38 |
15 |
15 |
5 |
22 |
10 |
11 |
20 |
11 |
17 |
18 |
15 |
13 |
13 |
20 |
GO:0031124 |
mRNA 3'-end processing |
464 |
31 |
15 |
15 |
11 |
26 |
12 |
12 |
12 |
15 |
8 |
14 |
12 |
11 |
13 |
32 |
21 |
8 |
34 |
16 |
14 |
5 |
14 |
13 |
11 |
22 |
11 |
15 |
16 |
13 |
15 |
13 |
15 |
GO:0006346 |
methylation-dependent chromatin silencing |
405 |
31 |
10 |
124 |
6 |
15 |
7 |
9 |
10 |
7 |
3 |
11 |
7 |
13 |
9 |
13 |
17 |
7 |
13 |
10 |
12 |
2 |
6 |
8 |
8 |
8 |
8 |
14 |
9 |
10 |
12 |
8 |
9 |
GO:0016556 |
mRNA modification |
393 |
31 |
19 |
125 |
6 |
16 |
12 |
9 |
5 |
7 |
3 |
22 |
5 |
7 |
10 |
14 |
10 |
3 |
22 |
8 |
10 |
1 |
7 |
1 |
7 |
7 |
6 |
9 |
9 |
7 |
12 |
8 |
6 |
GO:0000154 |
rRNA modification |
367 |
31 |
7 |
77 |
5 |
8 |
10 |
7 |
5 |
22 |
6 |
13 |
5 |
9 |
9 |
16 |
13 |
3 |
24 |
6 |
8 |
6 |
8 |
7 |
9 |
17 |
12 |
12 |
7 |
10 |
7 |
14 |
5 |
GO:0034661 |
ncRNA catabolic process |
364 |
31 |
15 |
15 |
10 |
16 |
12 |
8 |
9 |
7 |
20 |
15 |
9 |
9 |
10 |
22 |
15 |
8 |
16 |
9 |
10 |
5 |
16 |
7 |
9 |
15 |
11 |
10 |
10 |
10 |
12 |
11 |
13 |
GO:0000373 |
Group II intron splicing |
309 |
29 |
12 |
11 |
10 |
9 |
10 |
10 |
10 |
10 |
0 |
10 |
11 |
16 |
10 |
18 |
11 |
3 |
12 |
10 |
14 |
0 |
9 |
6 |
11 |
13 |
9 |
11 |
11 |
11 |
11 |
10 |
10 |
GO:0006378 |
mRNA polyadenylation |
291 |
31 |
8 |
9 |
7 |
14 |
8 |
8 |
8 |
10 |
5 |
7 |
7 |
8 |
9 |
21 |
11 |
7 |
23 |
10 |
8 |
3 |
8 |
8 |
7 |
15 |
7 |
10 |
12 |
8 |
7 |
8 |
10 |
GO:0042793 |
transcription from plastid promoter |
288 |
30 |
7 |
72 |
7 |
8 |
7 |
7 |
7 |
10 |
3 |
7 |
6 |
7 |
8 |
15 |
7 |
3 |
12 |
7 |
7 |
0 |
8 |
9 |
7 |
8 |
7 |
7 |
7 |
7 |
7 |
7 |
7 |
GO:0050684 |
regulation of mRNA processing |
283 |
31 |
9 |
8 |
6 |
15 |
6 |
7 |
7 |
9 |
4 |
9 |
6 |
7 |
7 |
19 |
14 |
5 |
18 |
11 |
13 |
2 |
8 |
8 |
7 |
16 |
8 |
8 |
9 |
8 |
9 |
8 |
12 |
GO:0000959 |
mitochondrial RNA metabolic process |
274 |
31 |
15 |
25 |
6 |
15 |
9 |
8 |
7 |
7 |
1 |
22 |
5 |
6 |
9 |
14 |
9 |
4 |
20 |
8 |
9 |
1 |
7 |
1 |
8 |
7 |
5 |
8 |
8 |
6 |
10 |
8 |
6 |
GO:0031086 |
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay |
266 |
31 |
5 |
9 |
6 |
13 |
6 |
8 |
9 |
6 |
6 |
7 |
7 |
6 |
8 |
18 |
10 |
5 |
13 |
8 |
6 |
7 |
10 |
13 |
8 |
12 |
7 |
9 |
10 |
6 |
7 |
9 |
12 |
GO:0031087 |
deadenylation-independent decapping of nuclear-transcribed mRNA |
266 |
31 |
5 |
9 |
6 |
13 |
6 |
8 |
9 |
6 |
6 |
7 |
7 |
6 |
8 |
18 |
10 |
5 |
13 |
8 |
6 |
7 |
10 |
13 |
8 |
12 |
7 |
9 |
10 |
6 |
7 |
9 |
12 |
GO:0051090 |
regulation of sequence-specific DNA binding transcription factor activity |
265 |
31 |
10 |
8 |
6 |
15 |
8 |
8 |
10 |
6 |
3 |
8 |
7 |
6 |
8 |
15 |
16 |
4 |
17 |
11 |
8 |
1 |
7 |
8 |
8 |
12 |
7 |
9 |
8 |
6 |
9 |
10 |
6 |
GO:0010586 |
miRNA metabolic process |
257 |
31 |
7 |
9 |
8 |
10 |
7 |
6 |
8 |
6 |
5 |
9 |
6 |
6 |
8 |
18 |
13 |
5 |
11 |
7 |
9 |
4 |
12 |
5 |
7 |
12 |
8 |
7 |
7 |
8 |
8 |
8 |
13 |
GO:0009452 |
7-methylguanosine RNA capping |
250 |
31 |
8 |
10 |
5 |
11 |
7 |
4 |
3 |
4 |
6 |
10 |
5 |
5 |
14 |
18 |
18 |
3 |
15 |
7 |
9 |
4 |
10 |
8 |
6 |
9 |
6 |
9 |
7 |
8 |
6 |
7 |
8 |
GO:0036260 |
RNA capping |
250 |
31 |
8 |
10 |
5 |
11 |
7 |
4 |
3 |
4 |
6 |
10 |
5 |
5 |
14 |
18 |
18 |
3 |
15 |
7 |
9 |
4 |
10 |
8 |
6 |
9 |
6 |
9 |
7 |
8 |
6 |
7 |
8 |
GO:0000245 |
spliceosomal complex assembly |
247 |
31 |
13 |
9 |
5 |
13 |
6 |
5 |
5 |
8 |
3 |
12 |
6 |
5 |
5 |
17 |
10 |
5 |
20 |
7 |
5 |
3 |
6 |
8 |
9 |
15 |
8 |
6 |
5 |
6 |
8 |
4 |
10 |
GO:0043628 |
ncRNA 3'-end processing |
246 |
31 |
8 |
11 |
6 |
10 |
7 |
7 |
6 |
6 |
10 |
7 |
6 |
11 |
10 |
8 |
11 |
4 |
17 |
7 |
8 |
7 |
5 |
7 |
8 |
7 |
5 |
10 |
9 |
7 |
8 |
7 |
6 |
GO:1900864 |
mitochondrial RNA modification |
244 |
28 |
14 |
24 |
5 |
14 |
8 |
7 |
6 |
6 |
0 |
21 |
4 |
5 |
8 |
13 |
8 |
3 |
20 |
7 |
8 |
0 |
6 |
0 |
7 |
6 |
4 |
7 |
7 |
5 |
9 |
7 |
5 |
GO:0006379 |
mRNA cleavage |
240 |
31 |
8 |
11 |
6 |
12 |
6 |
6 |
7 |
7 |
4 |
8 |
6 |
8 |
7 |
15 |
9 |
8 |
13 |
8 |
7 |
3 |
9 |
7 |
6 |
10 |
6 |
6 |
7 |
7 |
7 |
6 |
10 |
GO:0006353 |
DNA-dependent transcription, termination |
230 |
31 |
8 |
9 |
6 |
10 |
7 |
4 |
6 |
7 |
2 |
8 |
8 |
7 |
7 |
13 |
10 |
8 |
8 |
10 |
8 |
1 |
4 |
4 |
9 |
11 |
8 |
11 |
9 |
7 |
8 |
7 |
5 |
GO:0031425 |
chloroplast RNA processing |
223 |
31 |
12 |
14 |
4 |
11 |
9 |
6 |
5 |
9 |
2 |
9 |
6 |
8 |
7 |
14 |
7 |
5 |
14 |
6 |
8 |
2 |
4 |
3 |
5 |
10 |
7 |
6 |
6 |
6 |
10 |
4 |
4 |
GO:0000184 |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
219 |
31 |
5 |
12 |
5 |
8 |
9 |
5 |
5 |
5 |
5 |
4 |
6 |
6 |
5 |
13 |
12 |
3 |
12 |
7 |
7 |
3 |
8 |
8 |
6 |
10 |
6 |
8 |
10 |
6 |
4 |
7 |
9 |
GO:0032784 |
regulation of DNA-dependent transcription, elongation |
217 |
31 |
7 |
9 |
5 |
8 |
9 |
5 |
4 |
6 |
5 |
7 |
5 |
5 |
9 |
10 |
11 |
3 |
16 |
4 |
7 |
5 |
5 |
8 |
6 |
10 |
7 |
8 |
5 |
7 |
6 |
7 |
8 |
GO:0006388 |
tRNA splicing, via endonucleolytic cleavage and ligation |
214 |
31 |
10 |
7 |
4 |
8 |
6 |
4 |
5 |
5 |
7 |
6 |
4 |
6 |
7 |
11 |
16 |
8 |
17 |
5 |
9 |
3 |
6 |
5 |
4 |
8 |
8 |
6 |
5 |
4 |
6 |
5 |
9 |
GO:0000387 |
spliceosomal snRNP assembly |
207 |
31 |
12 |
7 |
5 |
8 |
7 |
4 |
5 |
7 |
3 |
6 |
6 |
7 |
6 |
10 |
5 |
2 |
13 |
8 |
7 |
3 |
6 |
11 |
7 |
10 |
4 |
8 |
9 |
4 |
6 |
5 |
6 |
GO:0031935 |
regulation of chromatin silencing |
199 |
31 |
9 |
14 |
4 |
7 |
7 |
7 |
5 |
5 |
2 |
9 |
5 |
6 |
6 |
11 |
9 |
3 |
7 |
7 |
7 |
2 |
5 |
6 |
6 |
6 |
7 |
6 |
5 |
7 |
8 |
5 |
6 |
GO:0016075 |
rRNA catabolic process |
186 |
31 |
9 |
7 |
6 |
8 |
7 |
4 |
4 |
3 |
16 |
7 |
5 |
5 |
4 |
11 |
6 |
4 |
7 |
5 |
6 |
1 |
10 |
3 |
4 |
7 |
6 |
5 |
5 |
5 |
5 |
5 |
6 |
GO:0031053 |
primary miRNA processing |
186 |
31 |
6 |
6 |
5 |
7 |
6 |
3 |
5 |
5 |
4 |
7 |
5 |
4 |
4 |
9 |
10 |
5 |
7 |
9 |
7 |
3 |
6 |
7 |
5 |
10 |
6 |
5 |
6 |
5 |
4 |
7 |
8 |
GO:0043484 |
regulation of RNA splicing |
183 |
30 |
6 |
6 |
5 |
7 |
5 |
5 |
4 |
5 |
3 |
6 |
3 |
6 |
6 |
12 |
7 |
5 |
12 |
5 |
8 |
0 |
6 |
5 |
4 |
11 |
6 |
5 |
7 |
5 |
5 |
5 |
8 |
GO:0030488 |
tRNA methylation |
180 |
31 |
5 |
5 |
3 |
5 |
4 |
4 |
3 |
5 |
3 |
6 |
4 |
7 |
4 |
14 |
17 |
3 |
9 |
6 |
8 |
3 |
7 |
5 |
5 |
9 |
5 |
5 |
6 |
5 |
6 |
5 |
4 |
GO:0080156 |
mitochondrial mRNA modification |
180 |
28 |
12 |
22 |
3 |
11 |
6 |
5 |
3 |
4 |
0 |
19 |
2 |
3 |
7 |
9 |
6 |
2 |
16 |
5 |
5 |
0 |
4 |
0 |
4 |
2 |
2 |
5 |
5 |
3 |
7 |
5 |
3 |
GO:0010587 |
miRNA catabolic process |
178 |
31 |
6 |
8 |
4 |
8 |
5 |
4 |
5 |
4 |
4 |
8 |
4 |
4 |
6 |
11 |
9 |
4 |
9 |
4 |
4 |
4 |
6 |
4 |
5 |
8 |
5 |
5 |
5 |
5 |
7 |
6 |
7 |
GO:0031167 |
rRNA methylation |
178 |
31 |
4 |
11 |
2 |
4 |
8 |
3 |
2 |
17 |
4 |
6 |
2 |
4 |
6 |
9 |
7 |
2 |
13 |
3 |
4 |
4 |
4 |
4 |
4 |
7 |
8 |
9 |
4 |
6 |
4 |
11 |
2 |
GO:0006370 |
7-methylguanosine mRNA capping |
177 |
31 |
6 |
7 |
3 |
7 |
5 |
3 |
2 |
3 |
4 |
6 |
4 |
3 |
12 |
12 |
15 |
3 |
8 |
6 |
8 |
3 |
7 |
7 |
4 |
5 |
4 |
7 |
5 |
4 |
4 |
5 |
5 |
GO:0031440 |
regulation of mRNA 3'-end processing |
177 |
31 |
6 |
5 |
3 |
12 |
4 |
5 |
5 |
6 |
3 |
6 |
5 |
3 |
4 |
11 |
9 |
2 |
12 |
7 |
7 |
2 |
5 |
5 |
4 |
9 |
4 |
5 |
5 |
5 |
6 |
5 |
7 |
GO:0002097 |
tRNA wobble base modification |
175 |
31 |
5 |
5 |
5 |
6 |
5 |
5 |
5 |
8 |
4 |
6 |
5 |
5 |
5 |
11 |
5 |
1 |
12 |
5 |
5 |
7 |
5 |
4 |
5 |
8 |
6 |
5 |
5 |
7 |
5 |
5 |
5 |
GO:0090501 |
RNA phosphodiester bond hydrolysis |
175 |
31 |
6 |
21 |
4 |
7 |
7 |
4 |
4 |
4 |
7 |
7 |
5 |
4 |
8 |
7 |
5 |
4 |
7 |
5 |
3 |
4 |
4 |
5 |
5 |
5 |
4 |
5 |
6 |
4 |
5 |
4 |
5 |
GO:0000288 |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
174 |
31 |
7 |
6 |
4 |
12 |
4 |
4 |
4 |
5 |
4 |
7 |
5 |
3 |
4 |
11 |
10 |
1 |
11 |
6 |
6 |
3 |
5 |
5 |
4 |
7 |
4 |
5 |
4 |
5 |
8 |
5 |
5 |
GO:0000289 |
nuclear-transcribed mRNA poly(A) tail shortening |
172 |
31 |
7 |
6 |
4 |
12 |
4 |
4 |
4 |
5 |
3 |
7 |
5 |
3 |
4 |
11 |
10 |
1 |
11 |
6 |
6 |
2 |
5 |
5 |
4 |
7 |
4 |
5 |
4 |
5 |
8 |
5 |
5 |
GO:0010599 |
production of lsiRNA involved in RNA interference |
171 |
30 |
3 |
4 |
9 |
3 |
6 |
5 |
6 |
3 |
2 |
4 |
6 |
5 |
6 |
15 |
4 |
4 |
7 |
2 |
4 |
0 |
11 |
2 |
6 |
8 |
6 |
9 |
8 |
3 |
3 |
6 |
11 |
GO:0042780 |
tRNA 3'-end processing |
169 |
31 |
6 |
5 |
4 |
8 |
5 |
4 |
4 |
4 |
7 |
5 |
4 |
9 |
8 |
7 |
5 |
3 |
6 |
5 |
6 |
5 |
4 |
5 |
5 |
5 |
4 |
8 |
7 |
5 |
6 |
5 |
5 |
GO:0045292 |
mRNA cis splicing, via spliceosome |
168 |
31 |
5 |
12 |
5 |
5 |
6 |
6 |
5 |
5 |
3 |
5 |
5 |
7 |
4 |
8 |
4 |
4 |
11 |
4 |
5 |
4 |
4 |
6 |
4 |
9 |
4 |
4 |
4 |
4 |
4 |
5 |
7 |
GO:0043620 |
regulation of DNA-dependent transcription in response to stress |
162 |
29 |
5 |
5 |
2 |
8 |
3 |
5 |
6 |
4 |
0 |
4 |
5 |
5 |
5 |
10 |
9 |
2 |
11 |
9 |
4 |
0 |
4 |
6 |
4 |
10 |
5 |
6 |
6 |
5 |
4 |
6 |
4 |
GO:0070919 |
production of siRNA involved in chromatin silencing by small RNA |
161 |
30 |
5 |
3 |
6 |
4 |
6 |
2 |
3 |
3 |
1 |
4 |
5 |
5 |
7 |
16 |
7 |
5 |
9 |
6 |
11 |
0 |
4 |
5 |
4 |
4 |
2 |
9 |
9 |
5 |
3 |
4 |
4 |
GO:0006432 |
phenylalanyl-tRNA aminoacylation |
156 |
31 |
5 |
3 |
6 |
6 |
4 |
3 |
4 |
5 |
3 |
5 |
4 |
6 |
4 |
12 |
3 |
2 |
7 |
3 |
7 |
5 |
3 |
4 |
4 |
5 |
9 |
6 |
6 |
3 |
4 |
10 |
5 |
GO:0043433 |
negative regulation of sequence-specific DNA binding transcription factor activity |
153 |
30 |
7 |
5 |
4 |
12 |
4 |
4 |
4 |
4 |
2 |
5 |
4 |
3 |
5 |
8 |
9 |
2 |
8 |
8 |
4 |
0 |
5 |
3 |
5 |
7 |
4 |
6 |
5 |
3 |
6 |
4 |
3 |
GO:0006438 |
valyl-tRNA aminoacylation |
144 |
31 |
5 |
3 |
2 |
6 |
7 |
2 |
5 |
2 |
2 |
4 |
2 |
3 |
6 |
7 |
18 |
1 |
23 |
3 |
2 |
2 |
5 |
3 |
3 |
5 |
3 |
3 |
3 |
3 |
2 |
5 |
4 |
GO:0006419 |
alanyl-tRNA aminoacylation |
139 |
31 |
6 |
4 |
4 |
5 |
3 |
2 |
7 |
8 |
3 |
3 |
3 |
3 |
4 |
8 |
4 |
2 |
16 |
4 |
5 |
3 |
4 |
4 |
3 |
5 |
3 |
2 |
2 |
3 |
5 |
8 |
3 |
GO:0002098 |
tRNA wobble uridine modification |
138 |
30 |
4 |
4 |
4 |
5 |
4 |
4 |
4 |
7 |
3 |
5 |
4 |
4 |
4 |
9 |
4 |
0 |
7 |
4 |
4 |
6 |
4 |
3 |
4 |
6 |
5 |
4 |
4 |
6 |
4 |
4 |
4 |
GO:0006421 |
asparaginyl-tRNA aminoacylation |
138 |
31 |
8 |
6 |
3 |
7 |
3 |
3 |
3 |
3 |
1 |
3 |
5 |
3 |
3 |
8 |
6 |
2 |
15 |
4 |
5 |
3 |
3 |
4 |
4 |
5 |
4 |
3 |
3 |
3 |
3 |
8 |
4 |
GO:0060211 |
regulation of nuclear-transcribed mRNA poly(A) tail shortening |
134 |
31 |
5 |
4 |
2 |
10 |
3 |
3 |
3 |
4 |
2 |
5 |
4 |
2 |
3 |
9 |
8 |
1 |
10 |
5 |
6 |
1 |
4 |
4 |
3 |
6 |
3 |
3 |
3 |
4 |
5 |
4 |
5 |
GO:0061013 |
regulation of mRNA catabolic process |
134 |
31 |
5 |
4 |
2 |
10 |
3 |
3 |
3 |
4 |
2 |
5 |
4 |
2 |
3 |
9 |
8 |
1 |
10 |
5 |
6 |
1 |
4 |
4 |
3 |
6 |
3 |
3 |
3 |
4 |
5 |
4 |
5 |
GO:1900151 |
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
134 |
31 |
5 |
4 |
2 |
10 |
3 |
3 |
3 |
4 |
2 |
5 |
4 |
2 |
3 |
9 |
8 |
1 |
10 |
5 |
6 |
1 |
4 |
4 |
3 |
6 |
3 |
3 |
3 |
4 |
5 |
4 |
5 |
GO:0000291 |
nuclear-transcribed mRNA catabolic process, exonucleolytic |
130 |
31 |
2 |
4 |
3 |
5 |
4 |
3 |
4 |
3 |
3 |
4 |
3 |
3 |
5 |
10 |
6 |
2 |
8 |
3 |
4 |
3 |
4 |
3 |
4 |
7 |
5 |
4 |
4 |
4 |
3 |
5 |
5 |
GO:0006376 |
mRNA splice site selection |
127 |
31 |
5 |
5 |
3 |
7 |
2 |
3 |
3 |
3 |
2 |
4 |
2 |
3 |
4 |
6 |
4 |
3 |
17 |
4 |
4 |
1 |
3 |
5 |
3 |
6 |
4 |
3 |
3 |
3 |
3 |
3 |
6 |
GO:0006435 |
threonyl-tRNA aminoacylation |
126 |
31 |
6 |
4 |
2 |
5 |
2 |
2 |
3 |
3 |
2 |
4 |
3 |
6 |
5 |
6 |
2 |
1 |
26 |
2 |
3 |
2 |
2 |
6 |
5 |
3 |
2 |
4 |
5 |
2 |
2 |
5 |
1 |
GO:0006426 |
glycyl-tRNA aminoacylation |
121 |
31 |
5 |
4 |
3 |
3 |
6 |
4 |
2 |
8 |
2 |
6 |
5 |
4 |
4 |
4 |
2 |
1 |
7 |
3 |
6 |
2 |
3 |
2 |
2 |
5 |
4 |
3 |
3 |
7 |
3 |
3 |
5 |
GO:0006430 |
lysyl-tRNA aminoacylation |
120 |
31 |
4 |
3 |
5 |
6 |
4 |
3 |
2 |
2 |
2 |
2 |
3 |
2 |
4 |
4 |
4 |
3 |
6 |
4 |
7 |
3 |
2 |
5 |
3 |
4 |
3 |
7 |
6 |
3 |
2 |
7 |
5 |
GO:0016553 |
base conversion or substitution editing |
120 |
30 |
5 |
7 |
2 |
7 |
3 |
3 |
3 |
3 |
0 |
5 |
2 |
4 |
2 |
7 |
5 |
2 |
15 |
6 |
6 |
1 |
4 |
1 |
2 |
4 |
2 |
3 |
4 |
2 |
4 |
3 |
3 |
GO:0006423 |
cysteinyl-tRNA aminoacylation |
119 |
31 |
5 |
3 |
3 |
6 |
2 |
3 |
2 |
3 |
2 |
7 |
4 |
4 |
4 |
5 |
8 |
2 |
8 |
2 |
3 |
2 |
3 |
5 |
2 |
4 |
4 |
2 |
4 |
2 |
2 |
6 |
7 |
GO:0000469 |
cleavage involved in rRNA processing |
118 |
31 |
4 |
19 |
3 |
5 |
5 |
3 |
3 |
3 |
3 |
5 |
4 |
3 |
3 |
5 |
3 |
3 |
5 |
3 |
2 |
1 |
3 |
2 |
3 |
3 |
3 |
3 |
3 |
3 |
3 |
3 |
4 |
GO:0006434 |
seryl-tRNA aminoacylation |
118 |
30 |
5 |
2 |
2 |
6 |
2 |
2 |
2 |
4 |
3 |
3 |
3 |
2 |
4 |
4 |
4 |
0 |
10 |
4 |
3 |
2 |
4 |
5 |
2 |
5 |
12 |
4 |
5 |
3 |
5 |
4 |
2 |
GO:0006433 |
prolyl-tRNA aminoacylation |
115 |
31 |
3 |
3 |
2 |
10 |
3 |
3 |
3 |
3 |
4 |
5 |
3 |
3 |
6 |
6 |
10 |
2 |
6 |
3 |
5 |
2 |
2 |
2 |
4 |
4 |
2 |
3 |
3 |
4 |
2 |
2 |
2 |
GO:0016073 |
snRNA metabolic process |
114 |
30 |
7 |
2 |
2 |
2 |
5 |
3 |
2 |
3 |
1 |
6 |
4 |
4 |
2 |
6 |
9 |
0 |
13 |
2 |
5 |
1 |
2 |
6 |
4 |
7 |
2 |
2 |
2 |
4 |
2 |
2 |
2 |
GO:0035279 |
mRNA cleavage involved in gene silencing by miRNA |
113 |
30 |
4 |
7 |
3 |
6 |
3 |
3 |
4 |
4 |
1 |
4 |
3 |
5 |
3 |
5 |
4 |
4 |
3 |
4 |
3 |
0 |
5 |
3 |
3 |
5 |
3 |
3 |
3 |
3 |
4 |
3 |
5 |
GO:0010239 |
chloroplast mRNA processing |
110 |
30 |
5 |
4 |
3 |
5 |
3 |
5 |
3 |
4 |
0 |
3 |
3 |
5 |
3 |
7 |
4 |
2 |
6 |
4 |
4 |
1 |
3 |
2 |
3 |
5 |
4 |
3 |
3 |
3 |
4 |
3 |
3 |
GO:0006383 |
transcription from RNA polymerase III promoter |
108 |
31 |
3 |
3 |
4 |
3 |
4 |
3 |
2 |
4 |
2 |
3 |
3 |
3 |
3 |
7 |
8 |
1 |
6 |
3 |
3 |
2 |
4 |
3 |
3 |
5 |
5 |
3 |
3 |
3 |
3 |
3 |
3 |
GO:0006429 |
leucyl-tRNA aminoacylation |
107 |
31 |
4 |
2 |
4 |
3 |
3 |
2 |
2 |
2 |
2 |
4 |
2 |
2 |
8 |
4 |
2 |
2 |
8 |
4 |
5 |
2 |
4 |
2 |
4 |
4 |
5 |
5 |
3 |
4 |
2 |
3 |
4 |
GO:0000966 |
RNA 5'-end processing |
106 |
17 |
0 |
4 |
0 |
7 |
20 |
0 |
0 |
0 |
0 |
1 |
0 |
5 |
8 |
2 |
4 |
0 |
2 |
0 |
5 |
0 |
0 |
0 |
12 |
24 |
0 |
2 |
2 |
6 |
1 |
1 |
0 |
GO:0006428 |
isoleucyl-tRNA aminoacylation |
106 |
31 |
4 |
3 |
2 |
4 |
2 |
2 |
2 |
4 |
4 |
3 |
2 |
4 |
5 |
3 |
3 |
2 |
12 |
4 |
2 |
3 |
4 |
3 |
2 |
8 |
3 |
2 |
2 |
2 |
3 |
2 |
5 |
GO:0048024 |
regulation of mRNA splicing, via spliceosome |
106 |
30 |
3 |
3 |
3 |
3 |
2 |
2 |
2 |
3 |
1 |
3 |
1 |
4 |
3 |
8 |
5 |
3 |
6 |
4 |
6 |
0 |
3 |
3 |
3 |
7 |
4 |
3 |
4 |
3 |
3 |
3 |
5 |
GO:1901259 |
chloroplast rRNA processing |
103 |
31 |
5 |
4 |
3 |
5 |
3 |
3 |
3 |
4 |
1 |
3 |
3 |
4 |
3 |
6 |
4 |
1 |
5 |
4 |
3 |
2 |
3 |
2 |
3 |
4 |
3 |
3 |
3 |
3 |
4 |
3 |
3 |
GO:0000380 |
alternative mRNA splicing, via spliceosome |
101 |
29 |
4 |
4 |
3 |
3 |
3 |
2 |
2 |
3 |
0 |
2 |
1 |
2 |
3 |
7 |
5 |
3 |
6 |
4 |
5 |
0 |
4 |
3 |
3 |
6 |
3 |
3 |
4 |
3 |
2 |
3 |
5 |
GO:0006422 |
aspartyl-tRNA aminoacylation |
101 |
31 |
12 |
2 |
6 |
4 |
3 |
1 |
1 |
6 |
1 |
3 |
2 |
4 |
3 |
2 |
1 |
1 |
16 |
2 |
2 |
7 |
2 |
1 |
3 |
1 |
7 |
1 |
1 |
2 |
1 |
1 |
2 |
GO:0001682 |
tRNA 5'-leader removal |
100 |
31 |
4 |
3 |
2 |
3 |
3 |
2 |
2 |
3 |
2 |
3 |
2 |
3 |
2 |
12 |
2 |
3 |
13 |
2 |
2 |
2 |
2 |
3 |
2 |
4 |
2 |
2 |
2 |
2 |
4 |
5 |
2 |
GO:1900865 |
chloroplast RNA modification |
99 |
28 |
4 |
4 |
3 |
5 |
3 |
3 |
4 |
3 |
0 |
3 |
3 |
3 |
3 |
5 |
4 |
2 |
5 |
4 |
4 |
0 |
3 |
0 |
3 |
6 |
3 |
3 |
3 |
3 |
4 |
3 |
3 |
GO:0043618 |
regulation of transcription from RNA polymerase II promoter in response to stress |
98 |
29 |
3 |
3 |
2 |
5 |
2 |
3 |
3 |
2 |
0 |
3 |
2 |
3 |
3 |
7 |
6 |
1 |
8 |
4 |
2 |
0 |
2 |
5 |
2 |
5 |
3 |
4 |
4 |
3 |
2 |
3 |
3 |
GO:0006431 |
methionyl-tRNA aminoacylation |
96 |
30 |
4 |
2 |
3 |
4 |
4 |
3 |
2 |
4 |
2 |
3 |
4 |
3 |
3 |
4 |
2 |
0 |
5 |
3 |
4 |
2 |
3 |
3 |
5 |
3 |
4 |
2 |
3 |
2 |
2 |
4 |
4 |
GO:0006427 |
histidyl-tRNA aminoacylation |
93 |
31 |
4 |
3 |
2 |
3 |
2 |
2 |
2 |
3 |
1 |
2 |
2 |
4 |
3 |
5 |
2 |
4 |
7 |
3 |
10 |
2 |
2 |
2 |
2 |
5 |
3 |
2 |
2 |
2 |
2 |
3 |
2 |
GO:0006424 |
glutamyl-tRNA aminoacylation |
91 |
31 |
3 |
5 |
3 |
4 |
2 |
2 |
2 |
2 |
2 |
3 |
2 |
2 |
5 |
4 |
3 |
3 |
8 |
3 |
2 |
3 |
3 |
4 |
2 |
3 |
3 |
2 |
2 |
2 |
2 |
1 |
4 |
GO:0006269 |
DNA replication, synthesis of RNA primer |
87 |
31 |
6 |
3 |
2 |
4 |
3 |
2 |
2 |
2 |
2 |
2 |
2 |
2 |
2 |
5 |
2 |
1 |
7 |
4 |
4 |
3 |
2 |
3 |
2 |
3 |
4 |
2 |
2 |
2 |
2 |
2 |
3 |
GO:0006420 |
arginyl-tRNA aminoacylation |
85 |
31 |
9 |
2 |
2 |
4 |
3 |
1 |
1 |
3 |
1 |
4 |
1 |
1 |
2 |
5 |
8 |
1 |
10 |
2 |
6 |
3 |
2 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
3 |
1 |
2 |
GO:0034227 |
tRNA thio-modification |
84 |
31 |
5 |
4 |
3 |
4 |
3 |
2 |
5 |
1 |
2 |
3 |
2 |
2 |
2 |
3 |
3 |
3 |
5 |
2 |
2 |
1 |
3 |
2 |
2 |
3 |
2 |
3 |
3 |
2 |
3 |
2 |
2 |
GO:0016180 |
snRNA processing |
83 |
30 |
3 |
2 |
2 |
2 |
2 |
3 |
2 |
3 |
1 |
2 |
2 |
4 |
2 |
2 |
6 |
0 |
13 |
2 |
5 |
1 |
2 |
2 |
3 |
3 |
2 |
2 |
2 |
2 |
2 |
2 |
2 |
GO:0006436 |
tryptophanyl-tRNA aminoacylation |
82 |
31 |
2 |
2 |
2 |
7 |
2 |
2 |
2 |
3 |
2 |
2 |
2 |
3 |
5 |
4 |
2 |
1 |
5 |
2 |
2 |
2 |
3 |
2 |
3 |
3 |
3 |
2 |
2 |
2 |
3 |
2 |
3 |
GO:0006344 |
maintenance of chromatin silencing |
81 |
30 |
2 |
2 |
2 |
3 |
2 |
4 |
2 |
2 |
0 |
2 |
4 |
2 |
2 |
6 |
3 |
3 |
1 |
3 |
5 |
1 |
2 |
1 |
3 |
5 |
3 |
2 |
3 |
3 |
3 |
3 |
2 |
GO:0016554 |
cytidine to uridine editing |
81 |
28 |
4 |
6 |
2 |
6 |
2 |
2 |
2 |
1 |
0 |
4 |
1 |
2 |
1 |
3 |
2 |
1 |
14 |
4 |
4 |
0 |
3 |
0 |
1 |
2 |
1 |
2 |
3 |
1 |
3 |
2 |
2 |
GO:0000478 |
endonucleolytic cleavage involved in rRNA processing |
80 |
30 |
3 |
18 |
2 |
3 |
2 |
2 |
2 |
2 |
2 |
3 |
2 |
2 |
2 |
3 |
2 |
2 |
4 |
2 |
1 |
0 |
2 |
1 |
2 |
2 |
2 |
2 |
1 |
2 |
2 |
2 |
3 |
GO:0090502 |
RNA phosphodiester bond hydrolysis, endonucleolytic |
80 |
30 |
3 |
18 |
2 |
3 |
2 |
2 |
2 |
2 |
2 |
3 |
2 |
2 |
2 |
3 |
2 |
2 |
4 |
2 |
1 |
0 |
2 |
1 |
2 |
2 |
2 |
2 |
1 |
2 |
2 |
2 |
3 |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
74 |
29 |
2 |
2 |
2 |
2 |
2 |
1 |
1 |
2 |
0 |
2 |
1 |
2 |
2 |
6 |
4 |
2 |
5 |
3 |
4 |
0 |
3 |
2 |
2 |
5 |
2 |
2 |
3 |
2 |
2 |
2 |
4 |
GO:0009299 |
mRNA transcription |
73 |
29 |
3 |
4 |
2 |
3 |
3 |
2 |
2 |
3 |
0 |
3 |
3 |
2 |
3 |
2 |
3 |
2 |
2 |
3 |
2 |
0 |
1 |
2 |
3 |
3 |
3 |
2 |
3 |
3 |
2 |
3 |
1 |
GO:0009303 |
rRNA transcription |
69 |
31 |
2 |
3 |
2 |
2 |
4 |
2 |
2 |
2 |
2 |
3 |
2 |
2 |
2 |
3 |
2 |
1 |
3 |
2 |
3 |
1 |
2 |
4 |
2 |
2 |
2 |
2 |
2 |
2 |
2 |
2 |
2 |
GO:0031937 |
positive regulation of chromatin silencing |
68 |
30 |
5 |
6 |
1 |
3 |
1 |
3 |
2 |
2 |
1 |
5 |
1 |
1 |
2 |
3 |
4 |
1 |
1 |
2 |
3 |
0 |
1 |
2 |
1 |
2 |
2 |
1 |
1 |
3 |
5 |
1 |
2 |
GO:0090308 |
regulation of methylation-dependent chromatin silencing |
68 |
30 |
5 |
6 |
1 |
3 |
1 |
3 |
2 |
2 |
1 |
5 |
1 |
1 |
2 |
3 |
4 |
1 |
1 |
2 |
3 |
0 |
1 |
2 |
1 |
2 |
2 |
1 |
1 |
3 |
5 |
1 |
2 |
GO:0090309 |
positive regulation of methylation-dependent chromatin silencing |
68 |
30 |
5 |
6 |
1 |
3 |
1 |
3 |
2 |
2 |
1 |
5 |
1 |
1 |
2 |
3 |
4 |
1 |
1 |
2 |
3 |
0 |
1 |
2 |
1 |
2 |
2 |
1 |
1 |
3 |
5 |
1 |
2 |
GO:0008616 |
queuosine biosynthetic process |
67 |
25 |
0 |
0 |
2 |
0 |
0 |
2 |
2 |
3 |
2 |
0 |
2 |
2 |
2 |
4 |
2 |
1 |
7 |
3 |
2 |
3 |
2 |
4 |
2 |
5 |
3 |
2 |
2 |
4 |
0 |
2 |
2 |
GO:0010501 |
RNA secondary structure unwinding |
66 |
31 |
2 |
2 |
2 |
3 |
2 |
2 |
2 |
2 |
1 |
1 |
1 |
1 |
2 |
3 |
2 |
2 |
4 |
3 |
1 |
1 |
3 |
4 |
2 |
3 |
2 |
3 |
3 |
2 |
1 |
2 |
2 |
GO:0000244 |
spliceosomal tri-snRNP complex assembly |
65 |
30 |
6 |
2 |
1 |
2 |
4 |
1 |
1 |
1 |
1 |
2 |
3 |
1 |
2 |
2 |
1 |
0 |
7 |
2 |
1 |
1 |
2 |
1 |
2 |
4 |
1 |
4 |
4 |
1 |
1 |
2 |
2 |
GO:0032786 |
positive regulation of DNA-dependent transcription, elongation |
65 |
29 |
3 |
2 |
2 |
2 |
5 |
1 |
1 |
3 |
1 |
3 |
2 |
1 |
1 |
3 |
3 |
0 |
6 |
0 |
2 |
1 |
1 |
2 |
2 |
3 |
2 |
4 |
1 |
2 |
2 |
1 |
3 |
GO:0006368 |
transcription elongation from RNA polymerase II promoter |
61 |
31 |
2 |
1 |
1 |
2 |
4 |
1 |
1 |
3 |
2 |
2 |
2 |
1 |
1 |
3 |
3 |
1 |
3 |
2 |
1 |
1 |
2 |
3 |
2 |
2 |
2 |
5 |
2 |
2 |
1 |
1 |
2 |
GO:0034243 |
regulation of transcription elongation from RNA polymerase II promoter |
61 |
31 |
2 |
1 |
1 |
2 |
4 |
1 |
1 |
3 |
2 |
2 |
2 |
1 |
1 |
3 |
3 |
1 |
3 |
2 |
1 |
1 |
2 |
3 |
2 |
2 |
2 |
5 |
2 |
2 |
1 |
1 |
2 |
GO:0042779 |
tRNA 3'-trailer cleavage |
57 |
31 |
2 |
2 |
1 |
2 |
2 |
1 |
1 |
1 |
4 |
2 |
1 |
1 |
5 |
2 |
2 |
1 |
2 |
2 |
1 |
3 |
1 |
3 |
2 |
2 |
1 |
2 |
3 |
1 |
2 |
1 |
1 |
GO:0061392 |
regulation of transcription from RNA polymerase II promoter in response to osmotic stress |
56 |
28 |
2 |
2 |
1 |
4 |
1 |
1 |
1 |
1 |
0 |
2 |
1 |
2 |
2 |
4 |
2 |
0 |
6 |
3 |
1 |
0 |
1 |
1 |
1 |
3 |
2 |
3 |
3 |
2 |
1 |
2 |
1 |
GO:0061416 |
regulation of transcription from RNA polymerase II promoter in response to salt stress |
56 |
28 |
2 |
2 |
1 |
4 |
1 |
1 |
1 |
1 |
0 |
2 |
1 |
2 |
2 |
4 |
2 |
0 |
6 |
3 |
1 |
0 |
1 |
1 |
1 |
3 |
2 |
3 |
3 |
2 |
1 |
2 |
1 |
GO:0006990 |
positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response |
49 |
29 |
3 |
3 |
1 |
3 |
1 |
1 |
1 |
1 |
0 |
3 |
1 |
1 |
1 |
2 |
1 |
1 |
4 |
2 |
1 |
0 |
1 |
2 |
1 |
2 |
1 |
2 |
2 |
1 |
3 |
1 |
2 |
GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
49 |
29 |
3 |
3 |
1 |
3 |
1 |
1 |
1 |
1 |
0 |
3 |
1 |
1 |
1 |
2 |
1 |
1 |
4 |
2 |
1 |
0 |
1 |
2 |
1 |
2 |
1 |
2 |
2 |
1 |
3 |
1 |
2 |
GO:1901522 |
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus |
49 |
29 |
3 |
3 |
1 |
3 |
1 |
1 |
1 |
1 |
0 |
3 |
1 |
1 |
1 |
2 |
1 |
1 |
4 |
2 |
1 |
0 |
1 |
2 |
1 |
2 |
1 |
2 |
2 |
1 |
3 |
1 |
2 |
GO:0034472 |
snRNA 3'-end processing |
48 |
30 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
5 |
0 |
11 |
1 |
2 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0034477 |
U6 snRNA 3'-end processing |
48 |
30 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
5 |
0 |
11 |
1 |
2 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0045013 |
carbon catabolite repression of transcription |
48 |
29 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
4 |
4 |
2 |
2 |
2 |
1 |
0 |
1 |
4 |
1 |
2 |
1 |
3 |
3 |
1 |
1 |
2 |
1 |
GO:0045014 |
negative regulation of transcription by glucose |
48 |
29 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
4 |
4 |
2 |
2 |
2 |
1 |
0 |
1 |
4 |
1 |
2 |
1 |
3 |
3 |
1 |
1 |
2 |
1 |
GO:0045990 |
carbon catabolite regulation of transcription |
48 |
29 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
4 |
4 |
2 |
2 |
2 |
1 |
0 |
1 |
4 |
1 |
2 |
1 |
3 |
3 |
1 |
1 |
2 |
1 |
GO:0046015 |
regulation of transcription by glucose |
48 |
29 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
4 |
4 |
2 |
2 |
2 |
1 |
0 |
1 |
4 |
1 |
2 |
1 |
3 |
3 |
1 |
1 |
2 |
1 |
GO:0000372 |
Group I intron splicing |
46 |
28 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
3 |
0 |
1 |
1 |
5 |
1 |
2 |
1 |
0 |
1 |
2 |
3 |
0 |
1 |
2 |
2 |
1 |
2 |
1 |
1 |
3 |
2 |
2 |
1 |
GO:0000376 |
RNA splicing, via transesterification reactions with guanosine as nucleophile |
46 |
28 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
3 |
0 |
1 |
1 |
5 |
1 |
2 |
1 |
0 |
1 |
2 |
3 |
0 |
1 |
2 |
2 |
1 |
2 |
1 |
1 |
3 |
2 |
2 |
1 |
GO:0006425 |
glutaminyl-tRNA aminoacylation |
46 |
31 |
2 |
1 |
1 |
1 |
2 |
2 |
2 |
2 |
1 |
3 |
1 |
1 |
1 |
2 |
1 |
1 |
2 |
2 |
1 |
1 |
2 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
2 |
2 |
GO:0070475 |
rRNA base methylation |
44 |
27 |
2 |
2 |
0 |
2 |
2 |
1 |
0 |
1 |
1 |
1 |
0 |
2 |
1 |
3 |
2 |
0 |
2 |
1 |
2 |
1 |
2 |
2 |
2 |
1 |
2 |
1 |
1 |
2 |
2 |
2 |
1 |
GO:0030490 |
maturation of SSU-rRNA |
43 |
30 |
1 |
9 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:1900363 |
regulation of mRNA polyadenylation |
43 |
31 |
1 |
1 |
1 |
2 |
1 |
2 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
3 |
1 |
2 |
2 |
1 |
1 |
1 |
2 |
GO:0006437 |
tyrosyl-tRNA aminoacylation |
42 |
31 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
4 |
1 |
2 |
3 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0016074 |
snoRNA metabolic process |
42 |
30 |
2 |
2 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
3 |
1 |
1 |
GO:0043144 |
snoRNA processing |
42 |
30 |
2 |
2 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
3 |
1 |
1 |
GO:0043619 |
regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
42 |
29 |
1 |
1 |
1 |
1 |
1 |
2 |
2 |
1 |
0 |
1 |
1 |
1 |
1 |
3 |
4 |
1 |
2 |
1 |
1 |
0 |
1 |
4 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
GO:0000354 |
cis assembly of pre-catalytic spliceosome |
39 |
31 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
GO:0002103 |
endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) |
39 |
28 |
2 |
2 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
2 |
1 |
1 |
1 |
3 |
1 |
1 |
3 |
1 |
1 |
0 |
2 |
0 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
GO:0006359 |
regulation of transcription from RNA polymerase III promoter |
39 |
30 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
5 |
0 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0009301 |
snRNA transcription |
39 |
28 |
0 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
2 |
1 |
1 |
2 |
1 |
1 |
0 |
2 |
2 |
4 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
3 |
1 |
GO:0016480 |
negative regulation of transcription from RNA polymerase III promoter |
39 |
30 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
5 |
0 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0071076 |
RNA 3' uridylation |
39 |
31 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
3 |
1 |
4 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0019988 |
charged-tRNA amino acid modification |
38 |
31 |
5 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0071951 |
conversion of methionyl-tRNA to N-formyl-methionyl-tRNA |
38 |
31 |
5 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0000963 |
mitochondrial RNA processing |
37 |
31 |
2 |
2 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
GO:0002100 |
tRNA wobble adenosine to inosine editing |
37 |
31 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
5 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0009304 |
tRNA transcription |
37 |
28 |
1 |
1 |
1 |
2 |
1 |
2 |
0 |
1 |
1 |
1 |
1 |
1 |
2 |
2 |
5 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
0 |
2 |
1 |
1 |
1 |
1 |
GO:0070526 |
threonylcarbamoyladenosine biosynthetic process |
37 |
30 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
3 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
2 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
GO:0080009 |
mRNA methylation |
37 |
30 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0006348 |
chromatin silencing at telomere |
36 |
29 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
2 |
3 |
GO:0031054 |
pre-miRNA processing |
35 |
27 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
0 |
1 |
1 |
2 |
1 |
2 |
2 |
1 |
0 |
1 |
1 |
0 |
3 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
GO:0000470 |
maturation of LSU-rRNA |
34 |
30 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0000488 |
maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) |
34 |
30 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0000489 |
maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) |
34 |
30 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0031554 |
regulation of DNA-dependent transcription, termination |
34 |
26 |
1 |
2 |
1 |
3 |
1 |
0 |
0 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
2 |
1 |
0 |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
GO:0031555 |
transcriptional attenuation |
33 |
25 |
1 |
2 |
1 |
3 |
1 |
0 |
0 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
2 |
0 |
1 |
2 |
1 |
0 |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
GO:0031564 |
transcription antitermination |
33 |
25 |
1 |
2 |
1 |
3 |
1 |
0 |
0 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
2 |
0 |
1 |
2 |
1 |
0 |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
GO:0042794 |
rRNA transcription from plastid promoter |
33 |
30 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
0 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:1900871 |
chloroplast mRNA modification |
33 |
28 |
2 |
2 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
0 |
1 |
2 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
GO:0010964 |
regulation of chromatin silencing by small RNA |
31 |
28 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
2 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0031120 |
snRNA pseudouridine synthesis |
31 |
10 |
4 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
0 |
4 |
2 |
0 |
0 |
4 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
4 |
1 |
4 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
GO:0040031 |
snRNA modification |
31 |
10 |
4 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
0 |
4 |
2 |
0 |
0 |
4 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
4 |
1 |
4 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
GO:0000957 |
mitochondrial RNA catabolic process |
30 |
30 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0031125 |
rRNA 3'-end processing |
29 |
24 |
1 |
5 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
0 |
1 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
0 |
GO:0000374 |
Group III intron splicing |
23 |
19 |
0 |
1 |
2 |
1 |
1 |
2 |
1 |
2 |
0 |
0 |
0 |
0 |
1 |
2 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
1 |
1 |
0 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
19 |
15 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
1 |
0 |
1 |
0 |
1 |
1 |
0 |
2 |
2 |
0 |
1 |
1 |
3 |
GO:0032968 |
positive regulation of transcription elongation from RNA polymerase II promoter |
18 |
13 |
1 |
0 |
0 |
0 |
3 |
0 |
0 |
2 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
1 |
1 |
3 |
0 |
1 |
0 |
0 |
0 |
GO:0031426 |
polycistronic mRNA processing |
16 |
15 |
1 |
1 |
0 |
0 |
1 |
0 |
0 |
1 |
0 |
1 |
1 |
1 |
0 |
2 |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
1 |
1 |
1 |
1 |
0 |
0 |
GO:0000462 |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
9 |
2 |
0 |
8 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0031936 |
negative regulation of chromatin silencing |
9 |
7 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
2 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
GO:0036265 |
RNA (guanine-N7)-methylation |
7 |
3 |
0 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
GO:0000447 |
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
5 |
2 |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000460 |
maturation of 5.8S rRNA |
5 |
2 |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000461 |
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
5 |
2 |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000466 |
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
5 |
2 |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000479 |
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
5 |
2 |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0070940 |
dephosphorylation of RNA polymerase II C-terminal domain |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0019083 |
viral transcription |
4 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
GO:0031119 |
tRNA pseudouridine synthesis |
4 |
1 |
0 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0006360 |
transcription from RNA polymerase I promoter |
3 |
1 |
0 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0043137 |
DNA replication, removal of RNA primer |
3 |
3 |
0 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0097056 |
selenocysteinyl-tRNA(Sec) biosynthetic process |
3 |
3 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000183 |
chromatin silencing at rDNA |
2 |
2 |
0 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000290 |
deadenylation-dependent decapping of nuclear-transcribed mRNA |
2 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0002943 |
tRNA dihydrouridine synthesis |
2 |
2 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0070329 |
tRNA seleno-modification |
2 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:2000232 |
regulation of rRNA processing |
2 |
2 |
0 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:2000234 |
positive regulation of rRNA processing |
2 |
2 |
0 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000390 |
spliceosomal complex disassembly |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000395 |
mRNA 5'-splice site recognition |
1 |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000451 |
rRNA 2'-O-methylation |
1 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000453 |
enzyme-directed rRNA 2'-O-methylation |
1 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0030466 |
chromatin silencing at silent mating-type cassette |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0031118 |
rRNA pseudouridine synthesis |
1 |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0031591 |
wybutosine biosynthetic process |
1 |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0032785 |
negative regulation of DNA-dependent transcription, elongation |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0034244 |
negative regulation of transcription elongation from RNA polymerase II promoter |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |