Child GO terms
- Original GO term
- GO:0010629
- Description
- negative regulation of gene expression
- Type
- BP
GO | description | genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0045892 | negative regulation of transcription, DNA-dependent | 4708 | 31 | 178 | 428 | 98 | 234 | 121 | 122 | 122 | 113 | 39 | 165 | 128 | 129 | 123 | 285 | 205 | 99 | 216 | 160 | 160 | 33 | 125 | 123 | 128 | 179 | 129 | 155 | 150 | 129 | 158 | 130 | 144 |
GO:0016458 | gene silencing | 3945 | 31 | 111 | 483 | 100 | 138 | 121 | 94 | 94 | 89 | 36 | 107 | 114 | 113 | 127 | 217 | 158 | 86 | 163 | 127 | 159 | 29 | 111 | 100 | 110 | 150 | 104 | 136 | 132 | 105 | 110 | 106 | 115 |
GO:0031047 | gene silencing by RNA | 2964 | 31 | 76 | 400 | 81 | 95 | 93 | 64 | 69 | 66 | 25 | 78 | 84 | 81 | 97 | 162 | 118 | 64 | 117 | 99 | 115 | 20 | 88 | 71 | 78 | 113 | 79 | 103 | 102 | 78 | 80 | 81 | 87 |
GO:0016441 | posttranscriptional gene silencing | 2119 | 31 | 55 | 268 | 58 | 74 | 60 | 53 | 56 | 51 | 25 | 56 | 63 | 72 | 68 | 106 | 83 | 42 | 83 | 68 | 65 | 19 | 64 | 55 | 64 | 82 | 56 | 67 | 65 | 56 | 54 | 64 | 67 |
GO:0035194 | posttranscriptional gene silencing by RNA | 1891 | 31 | 49 | 260 | 53 | 63 | 55 | 43 | 48 | 46 | 20 | 52 | 57 | 58 | 60 | 96 | 72 | 37 | 72 | 62 | 56 | 16 | 59 | 49 | 54 | 72 | 52 | 59 | 57 | 49 | 48 | 57 | 60 |
GO:0045814 | negative regulation of gene expression, epigenetic | 1471 | 31 | 39 | 259 | 29 | 48 | 44 | 35 | 34 | 29 | 11 | 38 | 41 | 40 | 42 | 91 | 55 | 35 | 60 | 42 | 57 | 7 | 36 | 43 | 37 | 42 | 35 | 48 | 43 | 36 | 40 | 36 | 39 |
GO:0070918 | production of small RNA involved in gene silencing by RNA | 1445 | 31 | 39 | 150 | 43 | 47 | 44 | 33 | 38 | 33 | 13 | 39 | 44 | 45 | 52 | 81 | 51 | 35 | 57 | 46 | 49 | 9 | 49 | 36 | 43 | 55 | 39 | 52 | 59 | 36 | 36 | 43 | 49 |
GO:0006342 | chromatin silencing | 1349 | 31 | 34 | 254 | 26 | 44 | 40 | 30 | 29 | 26 | 10 | 34 | 37 | 37 | 37 | 81 | 51 | 32 | 54 | 37 | 54 | 6 | 33 | 41 | 34 | 36 | 32 | 45 | 40 | 33 | 36 | 32 | 34 |
GO:0016246 | RNA interference | 1208 | 31 | 32 | 187 | 34 | 37 | 32 | 27 | 30 | 31 | 11 | 32 | 35 | 37 | 39 | 56 | 44 | 26 | 42 | 36 | 33 | 7 | 43 | 31 | 35 | 42 | 31 | 41 | 38 | 31 | 32 | 35 | 41 |
GO:0030422 | production of siRNA involved in RNA interference | 1082 | 31 | 29 | 143 | 32 | 35 | 31 | 26 | 29 | 26 | 9 | 29 | 34 | 35 | 37 | 54 | 37 | 24 | 42 | 30 | 30 | 6 | 41 | 27 | 33 | 39 | 28 | 34 | 35 | 26 | 29 | 33 | 39 |
GO:0035195 | gene silencing by miRNA | 1074 | 31 | 26 | 201 | 29 | 35 | 32 | 22 | 28 | 24 | 9 | 29 | 30 | 32 | 30 | 54 | 38 | 19 | 39 | 34 | 28 | 7 | 32 | 29 | 27 | 40 | 27 | 29 | 30 | 25 | 25 | 28 | 36 |
GO:0035196 | production of miRNAs involved in gene silencing by miRNA | 770 | 31 | 19 | 136 | 23 | 24 | 21 | 16 | 22 | 17 | 7 | 21 | 20 | 24 | 23 | 40 | 24 | 16 | 26 | 22 | 21 | 5 | 26 | 15 | 19 | 31 | 20 | 24 | 24 | 16 | 17 | 21 | 30 |
GO:0010267 | production of ta-siRNAs involved in RNA interference | 640 | 31 | 15 | 111 | 21 | 17 | 18 | 15 | 16 | 14 | 6 | 16 | 20 | 20 | 21 | 33 | 22 | 13 | 23 | 15 | 16 | 3 | 25 | 11 | 18 | 25 | 15 | 20 | 21 | 14 | 14 | 19 | 23 |
GO:0031048 | chromatin silencing by small RNA | 471 | 30 | 10 | 119 | 11 | 11 | 14 | 7 | 8 | 8 | 4 | 9 | 11 | 11 | 13 | 28 | 15 | 14 | 20 | 14 | 19 | 0 | 11 | 14 | 9 | 10 | 8 | 17 | 17 | 10 | 10 | 9 | 10 |
GO:0006346 | methylation-dependent chromatin silencing | 405 | 31 | 10 | 124 | 6 | 15 | 7 | 9 | 10 | 7 | 3 | 11 | 7 | 13 | 9 | 13 | 17 | 7 | 13 | 10 | 12 | 2 | 6 | 8 | 8 | 8 | 8 | 14 | 9 | 10 | 12 | 8 | 9 |
GO:0060968 | regulation of gene silencing | 355 | 31 | 13 | 21 | 7 | 12 | 14 | 13 | 10 | 9 | 3 | 12 | 13 | 14 | 13 | 19 | 16 | 4 | 18 | 12 | 13 | 2 | 9 | 11 | 16 | 13 | 11 | 9 | 9 | 11 | 11 | 8 | 9 |
GO:0080188 | RNA-directed DNA methylation | 350 | 31 | 13 | 12 | 10 | 13 | 13 | 8 | 9 | 7 | 3 | 11 | 9 | 9 | 11 | 30 | 12 | 10 | 13 | 11 | 22 | 4 | 11 | 13 | 9 | 10 | 8 | 15 | 14 | 10 | 11 | 10 | 9 |
GO:0031935 | regulation of chromatin silencing | 199 | 31 | 9 | 14 | 4 | 7 | 7 | 7 | 5 | 5 | 2 | 9 | 5 | 6 | 6 | 11 | 9 | 3 | 7 | 7 | 7 | 2 | 5 | 6 | 6 | 6 | 7 | 6 | 5 | 7 | 8 | 5 | 6 |
GO:0031053 | primary miRNA processing | 186 | 31 | 6 | 6 | 5 | 7 | 6 | 3 | 5 | 5 | 4 | 7 | 5 | 4 | 4 | 9 | 10 | 5 | 7 | 9 | 7 | 3 | 6 | 7 | 5 | 10 | 6 | 5 | 6 | 5 | 4 | 7 | 8 |
GO:0010599 | production of lsiRNA involved in RNA interference | 171 | 30 | 3 | 4 | 9 | 3 | 6 | 5 | 6 | 3 | 2 | 4 | 6 | 5 | 6 | 15 | 4 | 4 | 7 | 2 | 4 | 0 | 11 | 2 | 6 | 8 | 6 | 9 | 8 | 3 | 3 | 6 | 11 |
GO:0070919 | production of siRNA involved in chromatin silencing by small RNA | 161 | 30 | 5 | 3 | 6 | 4 | 6 | 2 | 3 | 3 | 1 | 4 | 5 | 5 | 7 | 16 | 7 | 5 | 9 | 6 | 11 | 0 | 4 | 5 | 4 | 4 | 2 | 9 | 9 | 5 | 3 | 4 | 4 |
GO:0060147 | regulation of posttranscriptional gene silencing | 154 | 30 | 4 | 5 | 3 | 5 | 7 | 6 | 5 | 4 | 1 | 3 | 8 | 8 | 7 | 8 | 7 | 1 | 11 | 5 | 6 | 0 | 4 | 5 | 10 | 7 | 4 | 3 | 4 | 4 | 3 | 3 | 3 |
GO:0060966 | regulation of gene silencing by RNA | 119 | 30 | 2 | 5 | 3 | 5 | 7 | 3 | 3 | 3 | 1 | 3 | 7 | 4 | 4 | 8 | 4 | 1 | 7 | 5 | 3 | 0 | 4 | 5 | 5 | 4 | 5 | 3 | 3 | 3 | 3 | 3 | 3 |
GO:0010495 | long-distance posttranscriptional gene silencing | 119 | 30 | 4 | 4 | 3 | 5 | 3 | 3 | 4 | 3 | 2 | 3 | 3 | 4 | 4 | 6 | 5 | 4 | 8 | 4 | 4 | 0 | 4 | 6 | 3 | 3 | 3 | 5 | 5 | 3 | 4 | 3 | 4 |
GO:0035279 | mRNA cleavage involved in gene silencing by miRNA | 113 | 30 | 4 | 7 | 3 | 6 | 3 | 3 | 4 | 4 | 1 | 4 | 3 | 5 | 3 | 5 | 4 | 4 | 3 | 4 | 3 | 0 | 5 | 3 | 3 | 5 | 3 | 3 | 3 | 3 | 4 | 3 | 5 |
GO:0060964 | regulation of gene silencing by miRNA | 88 | 29 | 2 | 4 | 2 | 4 | 6 | 2 | 2 | 2 | 1 | 2 | 6 | 3 | 3 | 6 | 3 | 0 | 5 | 4 | 2 | 0 | 3 | 4 | 4 | 3 | 3 | 2 | 2 | 2 | 2 | 2 | 2 |
GO:0006344 | maintenance of chromatin silencing | 81 | 30 | 2 | 2 | 2 | 3 | 2 | 4 | 2 | 2 | 0 | 2 | 4 | 2 | 2 | 6 | 3 | 3 | 1 | 3 | 5 | 1 | 2 | 1 | 3 | 5 | 3 | 2 | 3 | 3 | 3 | 3 | 2 |
GO:0090308 | regulation of methylation-dependent chromatin silencing | 68 | 30 | 5 | 6 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 5 | 1 | 1 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 5 | 1 | 2 |
GO:0090309 | positive regulation of methylation-dependent chromatin silencing | 68 | 30 | 5 | 6 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 5 | 1 | 1 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 5 | 1 | 2 |
GO:0031937 | positive regulation of chromatin silencing | 68 | 30 | 5 | 6 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 5 | 1 | 1 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 5 | 1 | 2 |
GO:0060148 | positive regulation of posttranscriptional gene silencing | 66 | 29 | 2 | 1 | 1 | 1 | 1 | 4 | 3 | 2 | 0 | 1 | 2 | 5 | 4 | 2 | 4 | 1 | 6 | 1 | 4 | 0 | 1 | 1 | 6 | 4 | 1 | 1 | 2 | 2 | 1 | 1 | 1 |
GO:0033562 | co-transcriptional gene silencing by RNA interference machinery | 53 | 27 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 0 | 1 | 2 | 2 | 2 | 4 | 4 | 2 | 4 | 2 | 2 | 0 | 0 | 1 | 2 | 2 | 2 | 3 | 3 | 2 | 1 | 2 | 0 |
GO:0045013 | carbon catabolite repression of transcription | 48 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 2 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0045014 | negative regulation of transcription by glucose | 48 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 2 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0035278 | negative regulation of translation involved in gene silencing by miRNA | 45 | 27 | 1 | 2 | 1 | 2 | 2 | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 4 | 1 | 0 | 1 | 2 | 1 | 4 | 2 | 1 | 2 | 1 | 0 | 2 | 2 |
GO:0016480 | negative regulation of transcription from RNA polymerase III promoter | 39 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 5 | 0 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0035281 | pre-miRNA export from nucleus | 36 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 |
GO:0006348 | chromatin silencing at telomere | 36 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 3 |
GO:0031054 | pre-miRNA processing | 35 | 27 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 0 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
GO:0035280 | miRNA loading onto RISC involved in gene silencing by miRNA | 33 | 25 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 3 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
GO:0070922 | small RNA loading onto RISC | 33 | 25 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 3 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
GO:0010964 | regulation of chromatin silencing by small RNA | 31 | 28 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0060145 | viral gene silencing in virus induced gene silencing | 23 | 23 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 |
GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 19 | 15 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 2 | 2 | 0 | 1 | 1 | 3 |
GO:0060969 | negative regulation of gene silencing | 9 | 7 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0031936 | negative regulation of chromatin silencing | 9 | 7 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0000183 | chromatin silencing at rDNA | 2 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0030466 | chromatin silencing at silent mating-type cassette | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |