PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: ZM03G30090
Organism: Zea mays

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G54490	pinoid-binding protein 1 (PBP1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G27280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. pinoid-binding protein 1	5	+	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL03G05240	No description available.	Chr3	+	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00010G02050	No description available.	scaffold00010	+	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0011G07390	No description available.	scaffold_11	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM13G35890	No description available.	Gm13	-	View
GM13G37990	No description available.	Gm13	+	View
GM15G07120	No description available.	Gm15	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR02G07780	No description available.	Chr02	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD03G018750	No description available.	3	+	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME11388G00190	No description available.	scaffold11388	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS01G57470	EF hand family protein, putative, expressed	1	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT01G41180	No description available.	Chr01	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL02G079520	Calcium-binding EF hand family protein (Fragment) (AHRD V1 *- D7MEH5_ARALY)%3B contains Interpro domain(s) IPR011992 EF-Hand type	ch02	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST07G026660	Centrin (AHRD V1 **-- Q179F4_AEDAE); contains Interpro domain(s) IPR011992 EF-Hand type	chr07	+	View
ST02G022510	Calcium-binding EF hand family protein (Fragment) (AHRD V1 *- D7MEH5_ARALY); contains Interpro domain(s) IPR011992 EF-Hand type	chr02	-	View