Anchorpoints

Gene id
VV10G01240
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV12G01820name=GSVIVG01020579001;chr12-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G29520No description available.scaffold_1+View
AL1G03080No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G03770RING 1B Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression. RING 1B (RING1B); FUNCTIONS IN: zinc ion binding; INVOLVED IN: negative regulation of gene expression, epigenetic; LOCATED IN: nucleus, PRC1 complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING 1A (TAIR:AT5G44280.1).1+View
AT1G28327unknown protein; Has 52 Blast hits to 52 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G03880No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G11980No description available.Bvchr8.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G23240No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G02930No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00083G00690No description available.supercontig_83+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G02680No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00007G00170No description available.scaffold00007+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G08760No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G21760E3 ubiquitin-protein ligase RING2-B (RING1b-B) (probable)LG6+View
FV3G12840E3 ubiquitin-protein ligase RING2 (RING1b) (similar to)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G44476No description available.Gm06-View
GM13G24571No description available.Gm13-View
GM13G37120No description available.Gm13-View
GM12G13270No description available.Gm12+View
GM12G33300No description available.Gm12+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G023360No description available.10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02307G00390No description available.scaffold02307-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G090595RING zinc finger proteinchr2+View
MT4G088520E3 ubiquitin-protein ligase RING1a-like protein C putativechr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G04790No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13870No description available.Chr07-View
PT11G05630No description available.Chr11+View
PT04G04700No description available.Chr04+View
PT17G01300No description available.Chr17+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G00290No description available.30190-View
RC29983G00550No description available.29983-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G053800E3 ubiquitin-protein ligase RING1 (AHRD V1 *--- B0WQV3_CULQU)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech07-View
SL02G077890E3 ubiquitin-protein ligase RING1 (AHRD V1 *-*- B0WQV3_CULQU)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type IPR017907 Zinc finger%2C RING-type%2C conserved sitech02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G021450E3 ubiquitin-protein ligase RING1 (AHRD V1 *--- E2BLF1_9HYME); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr07+View
ST02G020780E3 ubiquitin-protein ligase RING1 (AHRD V1 *--- E2BLF1_9HYME); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G17930No description available.scaffold_6-View
TC0002G17800No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G24550No description available.ch1-1+View
TP1G02630similar to AT1G03770|RING1B (RING 1B)ch1-1+View


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Gene id
Species
Description
Chromosome
Strand