PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: VV06G11020
Organism: Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL6G12060	No description available.	scaffold_6	+	View
AL6G19620	No description available.	scaffold_6	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G12180	calcium-dependent protein kinase 17 calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). member of Calcium Dependent Protein Kinase	5	+	View
AT5G19360	calcium-dependent protein kinase 34 (CPK34); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 17 (TAIR:AT5G12180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). calcium-dependent protein kinase 34 member of Calcium Dependent Protein Kinase	5	-	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV4G13950	No description available.	Bvchr4.sca001	+	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL02G22860	No description available.	Chr2	-	View

Cucumis melo

Gene id	Description	Chromosome	Strand	Multiplicon
CM00022G03840	No description available.	CM3.5_scaffold00022	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00157G00550	No description available.	supercontig_157	-	View
CP00033G01090	No description available.	supercontig_33	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_006G17250	No description available.	scaffold_6	-	View
CRU_006G10400	No description available.	scaffold_6	+	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0002G31300	No description available.	scaffold_2	+	View
EG0010G06030	No description available.	scaffold_10	-	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV2G47790	Calcium-dependent protein kinase 17 (similar to)	LG2	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM02G44720	No description available.	Gm02	-	View
GM14G04010	No description available.	Gm14	+	View
GM07G36000	No description available.	Gm07	-	View
GM20G08140	No description available.	Gm20	+	View

Lotus japonicus

Gene id	Description	Chromosome	Strand	Multiplicon
LJ2G046040	No description available.	chr2	-	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME07991G00100	No description available.	scaffold07991	-	View
ME06916G01220	No description available.	scaffold06916	+	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT5G089320	calmodulin-domain kinase CDPK protein	chr5	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT09G06920	No description available.	Chr09	-	View
PT01G27470	No description available.	Chr01	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL11G064900	Calcium-dependent protein kinase 1 (AHRD V1 **** Q3YAS9_PETIN)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinase	ch11	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST01G008910	Calcium-dependent protein kinase 8 (AHRD V1 **** Q6KC54_NICPL); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase	chr01	+	View
ST01G009440	Calcium-dependent protein kinase 17 (AHRD V1 **** Q6KC53_NICPL); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase	chr01	+	View
ST11G020700	Calcium-dependent protein kinase 17 (AHRD V1 **** Q6KC53_NICPL); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase	chr11	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0009G24350	No description available.	scaffold_9	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP6G31460	similar to AT5G12180\|CPK17	ch6-6	-	View