Anchorpoints

Gene id
TP5G35460
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP4G16820similar to AT2G34560|katanin, putativech4-6+View
TP6G02380similar to AT4G02480|AAA-type ATPase family proteinch6-1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G19790No description available.scaffold_4+View
AL1G02150No description available.scaffold_1-View
AL6G38890No description available.scaffold_6+View
AL2G29450No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G02480AAA-type ATPase family protein AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink).4-View
AT1G80350ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects. P-loop containing nucleoside triphosphate hydrolases superfamily protein1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G18020No description available.A07-View
BR02G25980No description available.A02+View
BR03G27250No description available.A03+View
BR05G15620No description available.A05+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G16300No description available.Bvchr9.sca026-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G02070No description available.Chr9+View
CL09G05610No description available.Chr9-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G01490No description available.CM3.5_scaffold00007-View
CM00060G00160No description available.CM3.5_scaffold00060+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00010G01620No description available.supercontig_10+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G25770No description available.scaffold_2+View
CRU_006G33450No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00080G00180No description available.scaffold00080+View
CS00001G07810No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G09970No description available.scaffold_8-View
EG0010G25720No description available.scaffold_10+View
EG0003G32230No description available.scaffold_3+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G16840Katanin p60 ATPase-containing subunit (Katanin p60 subunit) (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G09050No description available.Gm08+View
GM10G02400No description available.Gm10-View
GM07G03820No description available.Gm07-View
GM15G01510No description available.Gm15-View
GM19G39580No description available.Gm19+View
GM13G43841No description available.Gm13+View
GM05G26100No description available.Gm05+View
GM08G22210No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G14650No description available.Chr08-View
GR07G12870No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G031150No description available.chr3-View
LJ4G003610No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G024320No description available.3+View
MD08G005580No description available.8+View
MD10G020840No description available.10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02853G00230No description available.scaffold02853-View
ME02196G00020No description available.scaffold02196-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G088730P-loop nucleoside triphosphate hydrolase superfamily proteinchr1-View
MT4G011810katanin p60 ATPase subunit-like proteinchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G22420AAA-type ATPase family protein, putative, expressed3-View
OS07G47530AAA-type ATPase family protein, putative, expressed7+View
OS06G0763026S protease regulatory subunit 6A, putative, expressed6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G06150No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G05780No description available.Chr03-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29841G00200No description available.29841+View
RC29841G00530No description available.29841+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G066810Katanin p60 ATPase-containing subunit (AHRD V1 **-- B6TID9_MAIZE)%3B contains Interpro domain(s) IPR003959 ATPase%2C AAA-type%2C corech06-View
SL09G074950Katanin p60 ATPase-containing subunit (AHRD V1 *--- KTNA1_ARATH)%3B contains Interpro domain(s) IPR003959 ATPase%2C AAA-type%2C corech09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G023350Katanin p60 ATPase-containing subunit (AHRD V1 **-* B6TID9_MAIZE); contains Interpro domain(s) IPR003959 ATPase, AAA-type, corechr06-View
ST12G022190ATP-dependent zinc metalloprotease FtsH 1 (AHRD V1 *-*- Q2JHR8_SYNJB); contains Interpro domain(s) IPR003959 ATPase, AAA-type, corechr12-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G05710name=GSVIVG01017172001;chr9+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G15150No description available.1-View
ZM09G21270No description available.9-View


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Gene id
Species
Description
Chromosome
Strand