Anchorpoints

Gene id
TP5G24180
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G01400No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G02290RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2); Has 5868 Blast hits to 5858 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 1823; Fungi - 365; Plants - 2709; Viruses - 17; Other Eukaryotes - 952 (source: NCBI BLink). RING/U-box superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G22480No description available.A07-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00051G00940No description available.CM3.5_scaffold00051-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00019G01750No description available.scaffold00019+View
CS00015G00410No description available.scaffold00015-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G17340No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G42010E3 ubiquitin-protein ligase At3g02290 (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G27730No description available.Gm08-View
GM18G50945No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G09620No description available.Chr13-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G046970anaphase-promoting complex subunit 11 RING-H2 finger proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G22810No description available.scaffold_3+View
PPE_001G30230No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G14030No description available.Chr10+View
PT04G11480No description available.Chr04+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G04730No description available.30174+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G012010RING-H2 finger protein (Fragment) (AHRD V1 *-*- Q7X9M1_WHEAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G012580Zinc finger family protein (AHRD V1 **-* D7M7G2_ARALY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr02+View
ST05G006020E3 ubiquitin-protein ligase At3g02290 (AHRD V1 *--- RING3_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr05-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G32500No description available.scaffold_2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G16070name=GSVIVG01036545001;chr14+View
VV01G10770name=GSVIVG01012252001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G46030protein binding protein1+View


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Gene id
Species
Description
Chromosome
Strand