Anchorpoints

Gene id
ST09G011680
Organism
Solanum tuberosum

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G09200No description available.scaffold_3-View
AL6G01040No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G09060Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 58888 Blast hits to 14270 proteins in 310 species: Archae - 10; Bacteria - 38; Metazoa - 658; Fungi - 1156; Plants - 55027; Viruses - 0; Other Eukaryotes - 1999 (source: NCBI BLink).3-View
AT5G01110Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT3G53170Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48730.1); Has 41000 Blast hits to 13619 proteins in 279 species: Archae - 1; Bacteria - 35; Metazoa - 326; Fungi - 348; Plants - 39122; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein3-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00029G03160No description available.scaffold00029+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G07210No description available.Chr4-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00002G01700No description available.CM3.5_scaffold00002+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00056G00960No description available.supercontig_56+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G18530No description available.scaffold_5-View
CRU_003G07850No description available.scaffold_3-View
CRU_006G00720No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00145G00040No description available.scaffold00145+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G25230No description available.scaffold_11-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G21820Pentatricopeptide repeat-containing protein At1g12300, mitochondrial, Precursor (probable)LG3+View
FV7G13880Pentatricopeptide repeat-containing protein At1g02060, chloroplastic, Precursor (similar to)LG7-View
FV6G11100Pentatricopeptide repeat-containing protein At3g09060 (putative)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G42471No description available.Gm18+View
GM07G17620No description available.Gm07+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G26120No description available.Chr02+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08270G00100No description available.scaffold08270+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G066990pentatricopeptide (PPR) repeat proteinchr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G63400PPR repeat containing protein, expressed1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G27770No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G11160No description available.Chr16+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G014210Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L7R1_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeatch09+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G02140No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G09160No description available.ch5-1+View
TP3G07510similar to AT3G09060|pentatricopeptide (PPR) repeat-containing proteinch3-1-View


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Gene id
Species
Description
Chromosome
Strand