PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: PT10G18500
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL5G26280	No description available.	scaffold_5	-	View
AL4G27130	No description available.	scaffold_4	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G40280	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56080.1); Has 1258 Blast hits to 1230 proteins in 178 species: Archae - 2; Bacteria - 211; Metazoa - 31; Fungi - 46; Plants - 944; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	2	-	View
AT3G56080	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G40280.1); Has 1162 Blast hits to 1119 proteins in 165 species: Archae - 0; Bacteria - 246; Metazoa - 1; Fungi - 5; Plants - 904; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).	3	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR03G20290	No description available.	A03	-	View
BR04G03640	No description available.	A04	+	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV0G38020	No description available.	Bvchr2_un.sca003	+	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL07G04410	No description available.	Chr7	-	View

Cucumis melo

Gene id	Description	Chromosome	Strand	Multiplicon
CM00033G01240	No description available.	CM3.5_scaffold00033	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00019G01380	No description available.	supercontig_19	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_004G21790	No description available.	scaffold_4	-	View
CRU_005G21530	No description available.	scaffold_5	-	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00021G00200	No description available.	scaffold00021	+	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0007G24590	No description available.	scaffold_7	-	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV7G30030	Probable methyltransferase C20orf7 homolog, mitochondrial, Precursor	LG7	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM02G43110	No description available.	Gm02	-	View
GM18G02830	No description available.	Gm18	+	View
GM11G35590	No description available.	Gm11	-	View
GM14G06200	No description available.	Gm14	-	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR12G07880	No description available.	Chr12	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD04G002260	No description available.	4	-	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME10689G00500	No description available.	scaffold10689	+	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT3G071530	methyltransferase PMT16 C putative	chr3	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS05G39520	methyltransferase, putative, expressed	5	-	View
OS01G61250	methyltransferase, putative, expressed	1	+	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_002G24480	No description available.	scaffold_2	-	View

Ricinus communis

Gene id	Description	Chromosome	Strand	Multiplicon
RC29729G00060	No description available.	29729	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL05G052500	Dehydration-responsive family protein (AHRD V1 **-- D7LF23_ARALY)%3B contains Interpro domain(s) IPR004159 Protein of unknown function DUF248%2C methyltransferase putative	ch05	+	View
SL06G051000	Dehydration-responsive family protein (AHRD V1 **-- D7LF23_ARALY)%3B contains Interpro domain(s) IPR004159 Protein of unknown function DUF248%2C methyltransferase putative	ch06	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST05G025160	Dehydration-responsive family protein (AHRD V1 **-- D7LF23_ARALY); contains Interpro domain(s) IPR004159 Protein of unknown function DUF248, methyltransferase putative	chr05	+	View
ST06G011290	Dehydration-responsive family protein (AHRD V1 **-- D7LF23_ARALY); contains Interpro domain(s) IPR004159 Protein of unknown function DUF248, methyltransferase putative	chr06	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0010G01090	No description available.	scaffold_10r	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP5G06450	similar to AT3G56080\|dehydration-responsive protein-related	ch5-1	+	View
TP4G22610	similar to AT2G40280\|dehydration-responsive family protein	ch4-6	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV13G10020	name=GSVIVG01032763001;	chr13	-	View