Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT08G03200
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G22960 | No description available. | Chr10 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G03520 | RAB GTPase homolog 8C RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink). | 5 | + | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00140G00400 | No description available. | scaffold00140 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV0G47120 | No description available. | Bvchr7_un.sca007 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL10G17930 | No description available. | Chr10 | + | View |
| CL08G07720 | No description available. | Chr8 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00011G03100 | No description available. | CM3.5_scaffold00011 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00092G00900 | No description available. | supercontig_92 | - | View |
| CP00053G01640 | No description available. | supercontig_53 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00300G00150 | No description available. | scaffold00300 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0001G13330 | No description available. | scaffold_1 | + | View |
| EG0007G21550 | No description available. | scaffold_7 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM20G33441 | No description available. | Gm20 | + | View |
| GM10G34120 | No description available. | Gm10 | - | View |
| GM10G06780 | No description available. | Gm10 | - | View |
| GM19G37020 | No description available. | Gm19 | - | View |
| GM13G20970 | No description available. | Gm13 | - | View |
| GM03G34330 | No description available. | Gm03 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR09G41280 | No description available. | Chr09 | + | View |
| GR11G23430 | No description available. | Chr11 | + | View |
| GR06G16110 | No description available. | Chr06 | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ5G029320 | No description available. | chr5 | - | View |
| LJ5G012000 | No description available. | chr5 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03883G00130 | No description available. | scaffold03883 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G090717 | RAB GTPase-like protein A5B | chr1 | - | View |
| MT7G103070 | RAB GTPase-like protein C2B | chr7 | - | View |
| MT1G062760 | RAB GTPase-like protein A5B | chr1 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_007G14760 | No description available. | scaffold_7 | + | View |
| PPE_006G25770 | No description available. | scaffold_6 | - | View |
| PPE_002G19850 | No description available. | scaffold_2 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G008460 | Ras-related protein Rab-18 (AHRD V1 ***- B6TSE5_MAIZE)%3B contains Interpro domain(s) IPR015598 Rab18 | ch09 | - | View |
| SL11G008020 | Ras-related protein Rab-18 (AHRD V1 ***- B6TSE5_MAIZE)%3B contains Interpro domain(s) IPR015598 Rab18 | ch11 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST11G012560 | Ras-related protein Rab-18 (AHRD V1 ***- B6TSE5_MAIZE); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type | chr11 | - | View |
| ST09G008020 | Ras-related protein Rab-18 (AHRD V1 ***- B6TSE5_MAIZE); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type | chr09 | - | View |
| ST11G029900 | Ras-related protein Rab-8A (AHRD V1 ***- C1C362_9MAXI); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type | chr11 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0010G08410 | No description available. | scaffold_10r | - | View |
| TC0005G06830 | No description available. | scaffold_5 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G02460 | name=GSVIVG01016180001; | chr13 | - | View |
| VV08G10690 | name=GSVIVG01033681001; | chr8 | + | View |
| VV13G02810 | name=GSVIVG01016227001; | chr13 | + | View |