Anchorpoints
- Gene id
- PT02G02670
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G23590 | No description available. | Chr05 | + | View |
PT04G16370 | No description available. | Chr04 | + | View |
PT09G12530 | No description available. | Chr09 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G00790 | No description available. | scaffold_7 | - | View |
AL8G08730 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G38910 | basic pentacysteine 5 (BPC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2). basic pentacysteine 5 Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats. | 4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G20190 | No description available. | A08 | + | View |
BR09G44730 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV1G07050 | No description available. | Bvchr1.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G14210 | No description available. | Chr8 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00014G03580 | No description available. | CM3.5_scaffold00014 | + | View |
CM00019G03170 | No description available. | CM3.5_scaffold00019 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00150G00090 | No description available. | supercontig_150 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G05200 | No description available. | scaffold00002 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G10720 | No description available. | scaffold_9 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G38950 | No description available. | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G02860 | No description available. | Gm04 | - | View |
GM06G02880 | No description available. | Gm06 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G12490 | No description available. | Chr02 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G030220 | No description available. | chr1 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD08G001170 | No description available. | 8 | - | View |
MD12G015010 | No description available. | 12 | - | View |
MD10G008450 | No description available. | 10 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02994G00070 | No description available. | scaffold02994 | - | View |
ME07917G00030 | No description available. | scaffold07917 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G023660 | GAGA-binding transcriptional activator BBR/BPC6-like protein | chr1 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G37770 | No description available. | scaffold_1 | - | View |
PPE_008G10070 | No description available. | scaffold_8 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G05000 | No description available. | 30170 | + | View |
RC30131G02900 | No description available. | 30131 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G110470 | GAGA-binding transcriptional activator (AHRD V1 ***- A1E2T9_MEDTR)%3B contains Interpro domain(s) IPR010409 GAGA binding-like | ch01 | + | View |
SL02G084230 | GAGA-binding transcriptional activator (AHRD V1 ***- A1E2T9_MEDTR)%3B contains Interpro domain(s) IPR010409 GAGA binding-like | ch02 | - | View |
SL04G081170 | GAGA-binding transcriptional activator (AHRD V1 ***- A1E2T9_MEDTR)%3B contains Interpro domain(s) IPR010409 GAGA binding-like | ch04 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G027470 | GAGA-binding transcriptional activator (AHRD V1 ***- A1E2T9_MEDTR); contains Interpro domain(s) IPR010409 GAGA binding-like | chr02 | - | View |
ST01G047920 | GAGA-binding transcriptional activator (AHRD V1 ***- A1E2T9_MEDTR); contains Interpro domain(s) IPR010409 GAGA binding-like | chr01 | + | View |
ST04G034550 | GAGA-binding transcriptional activator (AHRD V1 ***- A1E2T9_MEDTR); contains Interpro domain(s) IPR010409 GAGA binding-like | chr04 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G03750 | No description available. | scaffold_8 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G05790 | name=GSVIVG01024162001; | chr3 | + | View |
VV18G10050 | name=GSVIVG01009841001; | chr18 | + | View |