Anchorpoints

Gene id
PPE_001G37950
Organism
Prunus persica

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PPE_007G18490No description available.scaffold_7+View
PPE_005G21190No description available.scaffold_5+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G13490No description available.scaffold_6-View
AL3G01420No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G13790AGAMOUS-like 15 AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis. AGAMOUS-like 15 (AGL15); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18 (TAIR:AT3G57390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00047G00990No description available.scaffold00047-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G06610No description available.A03-View
BR10G19400No description available.A10+View
BR07G22470No description available.A07+View
BR05G35670No description available.A05+View
BR08G22520No description available.A08-View
BR01G34870No description available.A01-View
BR03G05530No description available.A03-View
BR03G40970No description available.A03+View
BR01G16130No description available.A01+View
BR04G27180No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G08230No description available.Bvchr1.sca001-View
BV6G16470No description available.Bvchr6.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G19700No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM01596G04990No description available.CM3.5_scaffold01596-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G01940No description available.supercontig_6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G11660No description available.scaffold_6-View
CRU_006G13620No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G00580No description available.scaffold00017+View
CS00030G00760No description available.scaffold00030-View
CS00002G05000No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G20050No description available.scaffold_9-View
EG0006G13090No description available.scaffold_6-View
EG0011G22610No description available.scaffold_11-View
EG0002G05450No description available.scaffold_2+View
EG0003G29660No description available.scaffold_3-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G21120MADS-box protein JOINTLESS (similar to)LG5+View
FV5G11740Agamous-like MADS-box protein AGL8 homolog (putative)LG5-View
FV1G14200Floral homeotic protein PMADS 1 (similar to)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G35610No description available.Gm07+View
GM06G02990No description available.Gm06-View
GM04G02980No description available.Gm04-View
GM15G09500No description available.Gm15+View
GM04G42420No description available.Gm04-View
GM11G07820No description available.Gm11+View
GM01G37470No description available.Gm01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G01150No description available.Chr03-View
GR13G09600No description available.Chr13+View
GR09G27110No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G030020No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G003850No description available.13-View
MD17G005530No description available.17+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09657G00200No description available.scaffold09657+View
ME06512G00700No description available.scaffold06512-View
ME07520G02270No description available.scaffold07520-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G113030MADS-box transcription factorchr3+View
MT1G029670MADS-box transcription factorchr1-View
MT1G038300MADS-box transcription factorchr1+View
MT5G021270MADS-box transcription factorchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G10504OsMADS3 - MADS-box family gene with MIKCc type-box, expressed1-View
OS03G54160OsMADS14 - MADS-box family gene with MIKCc type-box, expressed3-View
OS01G66030OsMADS2 - MADS-box family gene with MIKCc type-box, expressed MADS-box transcription factor 21-View
OS06G49840MADS-box transcription factor 16 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G02840No description available.Chr02-View
PT07G01080No description available.Chr07-View
PT07G01700No description available.Chr07-View
PT05G11800No description available.Chr05-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G055920Agamous MADS-box transcription factor (AHRD V1 **-- B2CDE2_9ASPA)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-boxch07+View
SL02G084630MADS-box transcription factor (AHRD V1 ***- Q4LEZ4_ASPOF)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-boxch02-View
SL04G081000MADS box transcription factor (AHRD V1 ***- Q8L5F5_DAUCA)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-boxch04+View
SL02G065730MADS box transcription factor (AHRD V1 ***- Q689E7_GENTR)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-boxch02-View
SL03G114830MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-boxch03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G023190AGAMOUS-like MADS box transcription factor (AHRD V1 *-*- Q400I2_ELAGV); contains Interpro domain(s) IPR002100 Transcription factor, MADS-boxchr07+View
ST03G028370MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-boxchr03-View
ST02G027750MADS-box transcription factor (AHRD V1 ***- Q4LEZ4_ASPOF); contains Interpro domain(s) IPR002100 Transcription factor, MADS-boxchr02-View
ST04G034390MADS box transcription factor (AHRD V1 ***- Q8L5F5_DAUCA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-boxchr04+View
ST03G024360MADS-box transcription factor (AHRD V1 ***- Q5KT55_9ASPA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-boxchr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G02300No description available.scaffold_1-View
TC0008G03550No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G30230similar to AT5G13790|AGL15 (AGAMOUS-LIKE 15)ch6-6+View
TP6G28320similar to AT5G15800|SEP1 (SEPALLATA1)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09840name=GSVIVG01009815001;chr18+View
VV17G04850name=GSVIVG01008140001;chr17-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G10990DNA binding protein8-View
ZM06G10280silky1;silky16+View
ZM05G04110m31 protein5+View
ZM06G15670No description available.6+View


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Gene id
Species
Description
Chromosome
Strand