Anchorpoints
- Gene id
- CP00013G01430
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G29940 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G63380 | AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. | 5 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G16260 | No description available. | Bvchr5.sca013 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G03490 | No description available. | Chr3 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G04460 | No description available. | CM3.5_scaffold00001 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G23430 | No description available. | scaffold_8 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00158G00070 | No description available. | scaffold00158 | - | View |
CS00003G00920 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G01060 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G10650 | 4-coumarate--CoA ligase-like 9 (At4CL4) (similar to) | scf0513158 | + | View |
FV0G12330 | 4-coumarate--CoA ligase-like 9 (At4CL4) (probable) | scf0513160 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G06070 | No description available. | Chr01 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD14G015630 | No description available. | 14 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09876G00080 | No description available. | scaffold09876 | - | View |
ME04953G00130 | No description available. | scaffold04953 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT15G09230 | No description available. | Chr15 | - | View |
PT01G33440 | No description available. | Chr01 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30147G04440 | No description available. | 30147 | + | View |
RC30190G01400 | No description available. | 30190 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G111170 | 4-coumarate-coa ligase (AHRD V1 **** B9I3N1_POPTR)%3B contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G023910 | 4-coumarate-coa ligase (AHRD V1 ***- B9I3N1_POPTR); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G12840 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G26470 | similar to AT5G63380|4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | ch2-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G01110 | name=GSVIVG01001826001; | chr14 | - | View |
VV17G07730 | name=GSVIVG01008498001; | chr17 | + | View |