Anchorpoints

Gene id
CP00013G01430
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G29940No description available.scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G63380AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.5-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G16260No description available.Bvchr5.sca013+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G03490No description available.Chr3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G04460No description available.CM3.5_scaffold00001-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G23430No description available.scaffold_8-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00158G00070No description available.scaffold00158-View
CS00003G00920No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G01060No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G106504-coumarate--CoA ligase-like 9 (At4CL4) (similar to)scf0513158+View
FV0G123304-coumarate--CoA ligase-like 9 (At4CL4) (probable)scf0513160+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G06070No description available.Chr01+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G015630No description available.14-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09876G00080No description available.scaffold09876-View
ME04953G00130No description available.scaffold04953-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G09230No description available.Chr15-View
PT01G33440No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G04440No description available.30147+View
RC30190G01400No description available.30190+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G1111704-coumarate-coa ligase (AHRD V1 **** B9I3N1_POPTR)%3B contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligasech03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G0239104-coumarate-coa ligase (AHRD V1 ***- B9I3N1_POPTR); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligasechr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G12840No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G26470similar to AT5G63380|4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G01110name=GSVIVG01001826001;chr14-View
VV17G07730name=GSVIVG01008498001;chr17+View


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Gene id
Species
Description
Chromosome
Strand