Anchorpoints
- Gene id
- CM01596G05500
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G08630 | No description available. | CM3.5_scaffold00007 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G24100 | No description available. | scaffold_2 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G19480 | DNA glycosylase superfamily protein DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4603 Blast hits to 4603 proteins in 1096 species: Archae - 62; Bacteria - 2357; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). | 1 | + | View |
AT1G75230 | DNA glycosylase superfamily protein DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G19480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G13980 | No description available. | A06 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G19720 | No description available. | Chr1 | + | View |
CL05G20070 | No description available. | Chr5 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00006G01170 | No description available. | supercontig_6 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G18240 | No description available. | scaffold_1 | + | View |
CRU_002G20810 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G04310 | No description available. | scaffold00002 | + | View |
CS00006G03640 | No description available. | scaffold00006 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G12670 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G15480 | DNA-3-methyladenine glycosylase 1 (probable) | LG1 | - | View |
FV2G50810 | DNA-3-methyladenine glycosylase 1 (probable) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G03390 | No description available. | Gm04 | - | View |
GM06G03470 | No description available. | Gm06 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G27310 | No description available. | Chr09 | - | View |
GR09G20150 | No description available. | Chr09 | - | View |
GR03G01420 | No description available. | Chr03 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G041610 | No description available. | chr5 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G015770 | No description available. | 12 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07012G01200 | No description available. | scaffold07012 | - | View |
ME02978G00120 | No description available. | scaffold02978 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G111890 | HhH-GPD base excision DNA repair family protein | chr3 | + | View |
MT5G020300 | HhH-GPD base excision DNA repair family protein | chr5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G38660 | No description available. | scaffold_1 | - | View |
PPE_007G17650 | No description available. | scaffold_7 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G03530 | No description available. | Chr02 | - | View |
PT05G22770 | No description available. | Chr05 | + | View |
PT07G02420 | No description available. | Chr07 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G04040 | No description available. | 30170 | + | View |
RC29634G00750 | No description available. | 29634 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G080470 | DNA-3-methyladenine glycosylase 1 (AHRD V1 ***- B6U6Y8_MAIZE)%3B contains Interpro domain(s) IPR003265 HhH-GPD domain | ch04 | + | View |
SL02G062720 | DNA-3-methyladenine glycosylase 1 (AHRD V1 ***- B6U6Y8_MAIZE)%3B contains Interpro domain(s) IPR003265 HhH-GPD domain | ch02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G033830 | DNA-3-methyladenine glycosylase 1 (AHRD V1 ***- B6U6Y8_MAIZE); contains Interpro domain(s) IPR003265 HhH-GPD domain | chr04 | + | View |
ST02G010350 | DNA-3-methyladenine glycosylase 1 (AHRD V1 *-*- B6U6Y8_MAIZE); contains Interpro domain(s) IPR003265 HhH-GPD domain | chr02 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G03240 | No description available. | scaffold_1 | - | View |
TC0008G02660 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G17350 | similar to AT1G19480|HhH-GPD base excision DNA repair family protein | ch1-1 | + | View |
TP5G30390 | similar to AT1G75230|HhH-GPD base excision DNA repair family protein | ch5-7 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV04G02090 | name=GSVIVG01018948001; | chr4 | + | View |
VV18G08990 | name=GSVIVG01009720001; | chr18 | + | View |