Anchorpoints
- Gene id
- CM00006G07750
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G17830 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G16640 | Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. translationally controlled tumor protein translationally controlled tumor protein (TCTP); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: Methionine sulfoxide reductase (MSS4-like) family protein (TAIR:AT3G05540.1); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | 3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G26680 | No description available. | A05 | + | View |
BR03G34820 | No description available. | A03 | - | View |
BR01G32550 | No description available. | A01 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G06910 | No description available. | Chr5 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G15590 | No description available. | scaffold_3 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00016G00260 | No description available. | scaffold00016 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G31580 | No description available. | scaffold_8 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G13260 | Translationally-controlled tumor protein homolog (TCTP) (putative) | LG4 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G29240 | No description available. | Gm10 | + | View |
GM09G04950 | Translationally-controlled tumor protein homolog | Gm09 | + | View |
GM15G15910 | No description available. | Gm15 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G30030 | No description available. | Chr07 | - | View |
GR05G06070 | No description available. | Chr05 | - | View |
GR13G12600 | No description available. | Chr13 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G015500 | No description available. | 13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03614G05050 | No description available. | scaffold03614 | - | View |
ME01551G03650 | No description available. | scaffold01551 | - | View |
ME11110G00300 | No description available. | scaffold11110 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G436620 | translationally-controlled tumor-like protein | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G12730 | No description available. | scaffold_1 | + | View |
PPE_006G32550 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G22120 | No description available. | Chr08 | + | View |
PT10G01340 | No description available. | Chr10 | + | View |
PT05G02480 | No description available. | Chr05 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30128G02250 | No description available. | 30128 | - | View |
RC29726G01620 | No description available. | 29726 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G31090 | No description available. | scaffold_5 | - | View |
TC0004G28700 | No description available. | scaffold_4 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G14930 | similar to AT3G16640|TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) | ch3-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV05G02800 | name=GSVIVG01017723001; | chr5 | + | View |