Anchorpoints
- Gene id
- CM00001G07400
- Organism
- Cucumis melo
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G02630 | No description available. | CM3.5_scaffold00007 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G16020 | No description available. | scaffold_3 | + | View |
AL1G48220 | No description available. | scaffold_1 | - | View |
AL7G24250 | No description available. | scaffold_7 | + | View |
AL1G03120 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G03800 | encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-10). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ERF domain protein 10 ERF domain protein 10 (ERF10); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: erf domain protein 9 (TAIR:AT5G44210.1); Has 6303 Blast hits to 5828 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6292; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | 1 | - | View |
AT1G53170 | encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene response factor 8 ethylene response factor 8 (ERF8); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5970 Blast hits to 5718 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5959; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | 1 | - | View |
AT3G15210 | ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ethylene responsive element binding factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation. | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G06880 | No description available. | A07 | + | View |
BR06G01270 | No description available. | A06 | + | View |
BR05G27870 | No description available. | A05 | - | View |
BR10G03840 | No description available. | A10 | + | View |
BR01G09550 | No description available. | A01 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV8G11850 | No description available. | Bvchr8.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G07750 | No description available. | Chr3 | + | View |
CL01G23270 | No description available. | Chr1 | - | View |
CL02G18310 | No description available. | Chr2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00007G00360 | No description available. | supercontig_7 | + | View |
CP00027G00150 | No description available. | supercontig_27 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G14140 | No description available. | scaffold_3 | + | View |
CRU_001G02710 | No description available. | scaffold_1 | - | View |
CRU_001G40400 | No description available. | scaffold_1 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00007G00220 | No description available. | scaffold00007 | + | View |
CS00007G00590 | No description available. | scaffold00007 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G20330 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G12900 | Ethylene-responsive transcription factor 12 (AtERF12) (putative) | LG3 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM15G08360 | No description available. | Gm15 | + | View |
GM07G31995 | No description available. | Gm07 | - | View |
GM13G34920 | No description available. | Gm13 | - | View |
GM12G35550 | No description available. | Gm12 | + | View |
GM06G44430 | No description available. | Gm06 | + | View |
GM12G13315 | No description available. | Gm12 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G15590 | No description available. | Chr10 | - | View |
GR10G25660 | No description available. | Chr10 | - | View |
GR09G16540 | No description available. | Chr09 | + | View |
GR11G02970 | No description available. | Chr11 | + | View |
GR06G08800 | No description available. | Chr06 | - | View |
GR02G06760 | No description available. | Chr02 | + | View |
GR12G12570 | No description available. | Chr12 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G026150 | No description available. | chr6 | + | View |
LJ6G026570 | No description available. | chr6 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD10G022960 | No description available. | 10 | - | View |
MD05G004990 | No description available. | 5 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04851G00330 | No description available. | scaffold04851 | + | View |
ME04667G00020 | No description available. | scaffold04667 | + | View |
ME04851G00710 | No description available. | scaffold04851 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G014300 | ethylene response factor | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G16890 | No description available. | scaffold_4 | + | View |
PPE_004G04840 | No description available. | scaffold_4 | + | View |
PPE_004G05280 | No description available. | scaffold_4 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G05170 | No description available. | Chr04 | + | View |
PT11G05690 | No description available. | Chr11 | + | View |
PT04G04750 | No description available. | Chr04 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29900G00210 | No description available. | 29900 | + | View |
RC30190G00240 | No description available. | 30190 | + | View |
RC29983G00450 | No description available. | 29983 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G006050 | Ethylene-responsive transcription factor 2 (AHRD V1 ***- B6SSU7_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch11 | - | View |
SL03G006320 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch03 | + | View |
SL02G077810 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6SU49_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G005390 | Ethylene-responsive transcription factor 2 (AHRD V1 **** B6SSU7_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr11 | + | View |
ST10G009310 | Ethylene-responsive transcription factor 4 (AHRD V1 **** B6SIZ8_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr10 | - | View |
ST02G020740 | Ethylene responsive transcription factor 12 (AHRD V1 **** C0J9I3_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr02 | - | View |
ST03G007380 | Ethylene-responsive transcription factor (AHRD V1 *-*- D5LMH1_9FABA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G17840 | No description available. | scaffold_6 | + | View |
TC0006G17380 | No description available. | scaffold_6 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G13420 | similar to AT3G15210|ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4) | ch3-1 | + | View |
TP7G15580 | similar to AT4G18450|ethylene-responsive factor, putative | ch7-4 | + | View |
TP1G39740 | similar to AT1G53170|ERF8 | ch1-2 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV10G01670 | name=GSVIVG01021146001; | chr10 | + | View |
VV12G01860 | name=GSVIVG01020584001; | chr12 | + | View |
VV10G01290 | name=GSVIVG01021098001; | chr10 | - | View |