Anchorpoints

Gene id
CM00001G07400
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CM00007G02630No description available.CM3.5_scaffold00007+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G16020No description available.scaffold_3+View
AL1G48220No description available.scaffold_1-View
AL7G24250No description available.scaffold_7+View
AL1G03120No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G03800encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-10). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ERF domain protein 10 ERF domain protein 10 (ERF10); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: erf domain protein 9 (TAIR:AT5G44210.1); Has 6303 Blast hits to 5828 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6292; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).1-View
AT1G53170encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene response factor 8 ethylene response factor 8 (ERF8); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5970 Blast hits to 5718 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5959; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).1-View
AT3G15210ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ethylene responsive element binding factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G06880No description available.A07+View
BR06G01270No description available.A06+View
BR05G27870No description available.A05-View
BR10G03840No description available.A10+View
BR01G09550No description available.A01-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G11850No description available.Bvchr8.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G07750No description available.Chr3+View
CL01G23270No description available.Chr1-View
CL02G18310No description available.Chr2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00007G00360No description available.supercontig_7+View
CP00027G00150No description available.supercontig_27+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G14140No description available.scaffold_3+View
CRU_001G02710No description available.scaffold_1-View
CRU_001G40400No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00007G00220No description available.scaffold00007+View
CS00007G00590No description available.scaffold00007+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G20330No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G12900Ethylene-responsive transcription factor 12 (AtERF12) (putative)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G08360No description available.Gm15+View
GM07G31995No description available.Gm07-View
GM13G34920No description available.Gm13-View
GM12G35550No description available.Gm12+View
GM06G44430No description available.Gm06+View
GM12G13315No description available.Gm12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G15590No description available.Chr10-View
GR10G25660No description available.Chr10-View
GR09G16540No description available.Chr09+View
GR11G02970No description available.Chr11+View
GR06G08800No description available.Chr06-View
GR02G06760No description available.Chr02+View
GR12G12570No description available.Chr12+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G026150No description available.chr6+View
LJ6G026570No description available.chr6+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G022960No description available.10-View
MD05G004990No description available.5+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04851G00330No description available.scaffold04851+View
ME04667G00020No description available.scaffold04667+View
ME04851G00710No description available.scaffold04851+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G014300ethylene response factorchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G16890No description available.scaffold_4+View
PPE_004G04840No description available.scaffold_4+View
PPE_004G05280No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G05170No description available.Chr04+View
PT11G05690No description available.Chr11+View
PT04G04750No description available.Chr04+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29900G00210No description available.29900+View
RC30190G00240No description available.30190+View
RC29983G00450No description available.29983+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G006050Ethylene-responsive transcription factor 2 (AHRD V1 ***- B6SSU7_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch11-View
SL03G006320Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch03+View
SL02G077810Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6SU49_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G005390Ethylene-responsive transcription factor 2 (AHRD V1 **** B6SSU7_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr11+View
ST10G009310Ethylene-responsive transcription factor 4 (AHRD V1 **** B6SIZ8_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr10-View
ST02G020740Ethylene responsive transcription factor 12 (AHRD V1 **** C0J9I3_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr02-View
ST03G007380Ethylene-responsive transcription factor (AHRD V1 *-*- D5LMH1_9FABA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G17840No description available.scaffold_6+View
TC0006G17380No description available.scaffold_6+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G13420similar to AT3G15210|ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)ch3-1+View
TP7G15580similar to AT4G18450|ethylene-responsive factor, putativech7-4+View
TP1G39740similar to AT1G53170|ERF8ch1-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G01670name=GSVIVG01021146001;chr10+View
VV12G01860name=GSVIVG01020584001;chr12+View
VV10G01290name=GSVIVG01021098001;chr10-View


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Gene id
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Description
Chromosome
Strand