Anchorpoints

Gene id
CL11G11510
Organism
Citrullus lanatus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G15710No description available.scaffold_3+View
AL1G48400No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G14940phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.3+View
AT1G53310phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 6864 Blast hits to 6795 proteins in 1908 species: Archae - 27; Bacteria - 2661; Metazoa - 3; Fungi - 0; Plants - 1763; Viruses - 0; Other Eukaryotes - 2410 (source: NCBI BLink). phosphoenolpyruvate carboxylase 1 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G28100No description available.A05-View
BR03G34200No description available.A03+View
BR08G01380No description available.A08+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00081G00520No description available.CM3.5_scaffold00081+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G40550No description available.scaffold_1-View
CRU_003G13880No description available.scaffold_3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G15860No description available.scaffold_1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G33820No description available.Gm12-View
GM12G35840Phosphoenolpyruvate carboxylaseGm12-View
GM13G34560No description available.Gm13+View
GM13G36670No description available.Gm13+View
GM06G33380No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G17350No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G004570No description available.chr3+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G021040No description available.3-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03741G00370No description available.scaffold03741+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G15880No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G11070No description available.Chr11+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G014250Phosphoenolpyruvate carboxylase 1 (AHRD V1 ***- Q9SCB3_SOLLC)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech12-View
SL10G007290Phosphoenolpyruvate carboxylase (AHRD V1 ***- A6YM32_RICCO)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G007910Phosphoenolpyruvate carboxylase (AHRD V1 ***- A6YM32_RICCO); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylasechr10+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39890similar to AT1G53310|ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1)ch1-2-View
TP3G13150similar to AT3G14940|ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)ch3-1+View


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Gene id
Species
Description
Chromosome
Strand