PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: CL06G00680
Organism: Citrullus lanatus

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
CL05G02870	No description available.	Chr5	+	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL5G31270	No description available.	scaffold_5	+	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G45080	cyclin p3;1 cyclin p3;1 (cycp3;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p3;2 (TAIR:AT3G60550.1); Has 1274 Blast hits to 1274 proteins in 212 species: Archae - 0; Bacteria - 18; Metazoa - 174; Fungi - 605; Plants - 231; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink).	2	+	View
AT3G60550	cyclin p3;2 cyclin p3;2 (CYCP3;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p3;1 (TAIR:AT2G45080.1); Has 1360 Blast hits to 1354 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 236; Fungi - 630; Plants - 217; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink).	3	+	View

Cucumis melo

Gene id	Description	Chromosome	Strand	Multiplicon
CM00052G02580	No description available.	CM3.5_scaffold00052	-	View
CM00006G03220	No description available.	CM3.5_scaffold00006	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_004G26700	No description available.	scaffold_4	+	View
CRU_005G25890	No description available.	scaffold_5	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT02G14340	No description available.	Chr02	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL01G090800	Cyclin-dependent kinase (AHRD V1 **** A6YTD1_CUCME)%3B contains Interpro domain(s) IPR012389 Negative regulatory factor PREG	ch01	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST01G029950	Cyclin-dependent kinase (AHRD V1 **** A6YTD1_CUCME); contains Interpro domain(s) IPR012389 Negative regulatory factor PREG	chr01	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP4G27140	similar to AT2G45080\|cycp3	ch4-6	+	View