Anchorpoints

Gene id
BR09G08290
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR04G13390No description available.A04-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G33710No description available.scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G50510LOB domain-containing protein 28 (LBD28); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 877 Blast hits to 872 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 877; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). LOB domain-containing protein 283-View
AT2G23660LOB domain-containing protein 10 LOB domain-containing protein 10 (LBD10); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 1085 Blast hits to 1079 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 18; Fungi - 1; Plants - 1055; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).2-View
AT5G66870ASYMMETRIC LEAVES 2-like 1 ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.5+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09170No description available.Bvchr6.sca003+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G03810No description available.supercontig_6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G15650No description available.scaffold_5+View
CRU_008G26780No description available.scaffold_8-View
CRU_004G02790No description available.scaffold_4-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G18850LOB domain-containing protein 36 (AS2-like protein 1) (similar to)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G06210No description available.Gm11+View
GM01G39060No description available.Gm01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G07340No description available.Chr08-View
GR11G10460No description available.Chr11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G014780No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03235G00410No description available.scaffold03235-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G15920No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G03950No description available.Chr07-View
PT05G13490No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29676G00230No description available.29676+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G090410LOB domain family protein (AHRD V1 ***- D7LG10_ARALY)%3B contains Interpro domain(s) IPR004883 Lateral organ boundaries%2C LOBch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G032450LOB domain family protein (AHRD V1 ***- D7LG10_ARALY); contains Interpro domain(s) IPR004883 Lateral organ boundaries, LOBchr02+View
ST12G032440LOB domain protein 4 (AHRD V1 ***- D7KL24_ARALY); contains Interpro domain(s) IPR004883 Lateral organ boundaries, LOBchr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G04840No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G29790similar to AT5G66870|ASL1ch2-4-View
TP5G11690similar to AT3G50510|LBD28 (LOB DOMAIN-CONTAINING PROTEIN 28)ch5-1+View
TP4G12720similar to AT2G30130|ASL5ch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G09360name=GSVIVG01004323001;chrUn-View


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Gene id
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Description
Chromosome
Strand