Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- BR08G22930
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G29560 | No description available. | A09 | + | View |
| BR07G07980 | No description available. | A07 | + | View |
| BR09G20880 | No description available. | A09 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G27680 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G25490 | One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stem ROOTS CURL IN NPA (RCN1); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to ethylene stimulus, abscisic acid mediated signaling pathway, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway, auxin polar transport; LOCATED IN: cell wall, plasma membrane, protein phosphatase type 2A complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A2 (TAIR:AT3G25800.1); Has 2785 Blast hits to 1557 proteins in 250 species: Archae - 15; Bacteria - 74; Metazoa - 1400; Fungi - 416; Plants - 342; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). ARM repeat superfamily protein | 1 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL05G23960 | No description available. | Chr5 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00016G05640 | No description available. | CM3.5_scaffold00016 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00001G01920 | No description available. | supercontig_1 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G23990 | No description available. | scaffold_1 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00019G00530 | No description available. | scaffold00019 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0002G24800 | No description available. | scaffold_2 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G01970 | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (PP2A, subunit A, beta isoform) | scf0513158 | + | View |
| FV5G10430 | Coatomer subunit alpha-1 (Alpha-COP 1) (similar to) | LG5 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM07G10000 | No description available. | Gm07 | - | View |
| GM02G10790 | No description available. | Gm02 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR08G18450 | No description available. | Chr08 | + | View |
| GR13G08130 | No description available. | Chr13 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD16G001880 | No description available. | 16 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME08359G00320 | No description available. | scaffold08359 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G31760 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G12750 | No description available. | Chr10 | + | View |
| PT08G11850 | No description available. | Chr08 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G069180 | Phosphatase 2A regulatory A subunit (AHRD V1 **** Q9S7C5_ORYSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helical | ch06 | + | View |
| SL05G009600 | Phosphatase 2A regulatory A subunit (AHRD V1 **** Q9S7C5_ORYSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helical | ch05 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST05G007720 | Phosphatase 2A regulatory A subunit (AHRD V1 **** Q9S7C5_ORYSA); contains Interpro domain(s) IPR011989 Armadillo-like helical | chr05 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G35610 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G22720 | similar to AT1G25490|RCN1 (ROOTS CURL IN NPA) | ch1-1 | - | View |
| TP2G15040 | similar to AT3G25800|PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2) | ch2-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G08000 | name=GSVIVG01011923001; | chr1 | - | View |