Anchorpoints
- Gene id
- BR05G26760
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G02110 | No description available. | A06 | - | View |
BR03G34790 | No description available. | A03 | - | View |
BR01G32580 | No description available. | A01 | + | View |
BR08G02440 | No description available. | A08 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G17620 | No description available. | scaffold_3 | - | View |
AL1G46790 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G51950 | indole-3-acetic acid inducible 18 indole-3-acetic acid inducible 18 (IAA18); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein 1 (TAIR:AT3G16500.1); Has 1911 Blast hits to 1901 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1911; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 1 | + | View |
AT3G16500 | phytochrome-associated protein 1 (PAP1) phytochrome-associated protein 1 (PAP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 18 (TAIR:AT1G51950.1); Has 1982 Blast hits to 1978 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). phytochrome-associated protein 1 | 3 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00056G01150 | No description available. | scaffold00056 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G49250 | No description available. | Bvchr9_un.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G11660 | No description available. | Chr8 | + | View |
CL07G12850 | No description available. | Chr7 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00018G02360 | No description available. | CM3.5_scaffold00018 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G38950 | No description available. | scaffold_1 | + | View |
CRU_003G15470 | No description available. | scaffold_3 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00175G00220 | No description available. | scaffold00175 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G15060 | Auxin-responsive protein IAA6 (probable) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G21461 | No description available. | Gm08 | + | View |
GM13G43050 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G07080 | No description available. | Chr11 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G032750 | No description available. | chr3 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07351G00140 | No description available. | scaffold07351 | - | View |
ME07402G00100 | No description available. | scaffold07402 | - | View |
ME05875G00090 | No description available. | scaffold05875 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G100780 | auxin-responsive AUX/IAA family protein | chr2 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS05G44810 | Auxin-responsive protein IAA18 OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed | 5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G19030 | No description available. | Chr01 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30146G00790 | No description available. | 30146 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G121060 | Auxin response factor 9 (AHRD V1 *-** ARFI_ARATH)%3B contains Interpro domain(s) IPR003311 AUX/IAA protein | ch03 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G035900 | Auxin response factor 4 (AHRD V1 *-** ARFD_ORYSJ); contains Interpro domain(s) IPR003311 AUX/IAA protein | chr03 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G14850 | similar to AT3G16500|PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1) | ch3-1 | - | View |
TP1G38590 | similar to AT1G51950|IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18) | ch1-2 | + | View |