Anchorpoints

Gene id
BR05G26160
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BR03G35150No description available.A03-View
BR01G31870No description available.A01+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G18950No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G17600indole-3-acetic acid inducible 31 indole-3-acetic acid inducible 31 (IAA31); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: gravitropism, response to auxin stimulus, shoot system development, root development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: stem, rosette leaf, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 30 (TAIR:AT3G62100.1); Has 1954 Blast hits to 1953 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1953; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA31 shares several residues with the conserved domain II region, believed to act as a degron in many of the rapidly degraded Aux/IAA family members. An IAA31 fusion protein is quite long-lived, but can be degraded more rapidly in the presence of auxin. Unlike many other family members, IAA31 transcript levels do not rise in response to auxin. Nevertheless, overexpression of IAA31 leads to defects in auxin-related processes such as gravitropism, root development, shoot development, and cotyledon vascular development.3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G16540No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00016G02480No description available.scaffold00016-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G33550No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G17750No description available.Gm13+View
GM17G04760No description available.Gm17-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G15730similar to AT3G17600|IAA31 (INDOLE-3-ACETIC ACID INDUCIBLE 31)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G02700name=GSVIVG01017711001;chr5-View


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Gene id
Species
Description
Chromosome
Strand