Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- BR03G49920
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G14090 | No description available. | scaffold_7 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G27800 | Choroplast protein phosphatase TAP38/PPH1 is required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1. thylakoid-associated phosphatase 38 thylakoid-associated phosphatase 38 (TAP38); FUNCTIONS IN: phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: photosynthetic electron transport chain, photosystem stoichiometry adjustment, dephosphorylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G31860.1); Has 5988 Blast hits to 5975 proteins in 460 species: Archae - 6; Bacteria - 321; Metazoa - 1365; Fungi - 680; Plants - 2480; Viruses - 9; Other Eukaryotes - 1127 (source: NCBI BLink). | 4 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00003G01070 | No description available. | supercontig_3 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G12260 | No description available. | scaffold_7 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM06G13600 | No description available. | Gm06 | + | View |
| GM04G41250 | No description available. | Gm04 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT3G491830 | protein phosphatase 2C-like protein | chr3 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT15G01060 | No description available. | Chr15 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G082960 | Serine/threonine phosphatase family protein (AHRD V1 **** C1E0J1_9CHLO)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2C | ch03 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST03G013020 | Serine/threonine phosphatase family protein (AHRD V1 **** C1E0J1_MICSR); contains Interpro domain(s) IPR015655 Protein phosphatase 2C | chr03 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0007G08840 | No description available. | scaffold_7 | - | View |
| TC0003G20160 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G25770 | similar to AT4G27800|protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1) | ch7-4 | - | View |