PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: BR02G23920
Organism: Brassica rapa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
BR07G19490	No description available.	A07	-	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL2G25690	No description available.	scaffold_2	+	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G76750	Protein of unknown function (DUF1278) Encodes a small cysteine-rich protein that is secreted by the egg cell during gamete interactions. The regulated secretion of EC1 by the egg cell upon sperm-egg interaction is proposed to ensure the appropriate localization of the cell-fusion machinery in distinct sperm membrane domains to accomplish gamete fusion. Protein of unknown function (DUF1278); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1278) (TAIR:AT4G39340.1); Has 86 Blast hits to 86 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).	1	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_002G22320	No description available.	scaffold_2	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP5G31900	No description available.	ch5-7	+	View