Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- BR02G13970
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR10G09890 | No description available. | A10 | - | View |
| BR03G11960 | No description available. | A03 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G15820 | No description available. | scaffold_7 | - | View |
| AL8G22320 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G56710 | Ribosomal protein L31e family protein Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT4G26230.1); Has 1085 Blast hits to 1085 proteins in 349 species: Archae - 139; Bacteria - 2; Metazoa - 457; Fungi - 145; Plants - 170; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). | 5 | - | View |
| AT4G26230 | Ribosomal protein L31e family protein Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1093 Blast hits to 1093 proteins in 354 species: Archae - 146; Bacteria - 2; Metazoa - 458; Fungi - 148; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). | 4 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G13840 | No description available. | scaffold_7 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR13G22870 | No description available. | Chr13 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL12G008720 | 60S ribosomal protein L31 (AHRD V1 ***- B6VC52_VERFO)%3B contains Interpro domain(s) IPR000054 Ribosomal protein L31e | ch12 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G24230 | similar to AT4G26230|60S ribosomal protein L31 (RPL31B) | ch7-4 | + | View |
| TP6G18460 | similar to AT5G56710|60S ribosomal protein L31 (RPL31C) | ch6-6 | - | View |