Anchorpoints
- Gene id
- BR01G08770
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G22330 | No description available. | A09 | - | View |
BR06G36290 | No description available. | A06 | - | View |
BR08G10970 | No description available. | A08 | - | View |
BR02G29390 | No description available. | A02 | - | View |
BR07G28550 | No description available. | A07 | + | View |
BR08G16880 | No description available. | A08 | + | View |
BR05G10660 | No description available. | A05 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G00690 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G72360 | Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 (HRE1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding protein (TAIR:AT3G16770.1); Has 6097 Blast hits to 5793 proteins in 253 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6054; Viruses - 2; Other Eukaryotes - 39 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein | 1 | + | View |
AT4G17490 | ethylene responsive element binding factor 6 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. It is involved in the response to reactive oxygen species and light stress. ethylene responsive element binding factor 6 (ERF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 5 (TAIR:AT5G47230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | - | View |
AT5G47220 | Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ethylene responsive element binding factor 2 | 5 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G09630 | No description available. | Bvchr3.sca001 | - | View |
BV7G02140 | No description available. | Bvchr7.sca021 | + | View |
BV5G22220 | No description available. | Bvchr5.sca004 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00021G02330 | No description available. | CM3.5_scaffold00021 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G00530 | No description available. | scaffold_8 | - | View |
CRU_002G18120 | No description available. | scaffold_2 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G17280 | No description available. | scaffold_4 | - | View |
EG0005G03420 | No description available. | scaffold_5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G15460 | No description available. | Gm17 | - | View |
GM10G04160 | No description available. | Gm10 | + | View |
GM07G04950 | No description available. | Gm07 | - | View |
GM16G01500 | No description available. | Gm16 | - | View |
GM19G34650 | No description available. | Gm19 | + | View |
GM01G41520 | No description available. | Gm01 | - | View |
GM12G13315 | No description available. | Gm12 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G23250 | No description available. | Chr08 | - | View |
GR06G21410 | No description available. | Chr06 | + | View |
GR03G17620 | No description available. | Chr03 | - | View |
GR08G15360 | No description available. | Chr08 | + | View |
GR07G14570 | No description available. | Chr07 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G016720 | No description available. | 9 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05875G01480 | No description available. | scaffold05875 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G100380 | ethylene response factor | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G35240 | No description available. | scaffold_6 | + | View |
PPE_005G06600 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G07170 | No description available. | Chr03 | - | View |
PT11G05690 | No description available. | Chr11 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G17840 | No description available. | scaffold_6 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G12020 | similar to AT5G47220|ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) | ch2-4 | - | View |
TP5G27450 | similar to AT1G72360|ethylene-responsive element-binding protein, putative | ch5-6 | + | View |