Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- BR01G00550
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G56410 | No description available. | A03 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G01780 | No description available. | scaffold_7 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G39620 | Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2453 (EMB2453); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 39741 Blast hits to 13102 proteins in 279 species: Archae - 3; Bacteria - 42; Metazoa - 323; Fungi - 447; Plants - 37702; Viruses - 0; Other Eukaryotes - 1224 (source: NCBI BLink). | 4 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL01G19360 | No description available. | Chr1 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00007G08210 | No description available. | CM3.5_scaffold00007 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G01380 | No description available. | scaffold_7 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0009G02790 | No description available. | scaffold_9 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G22980 | Pentatricopeptide repeat-containing protein At5g38730 (similar to) | scf0513168 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM05G31640 | No description available. | Gm05 | - | View |
| GM08G14860 | No description available. | Gm08 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME08265G00310 | No description available. | scaffold08265 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_002G18930 | No description available. | scaffold_2 | - | View |
| PPE_006G18080 | No description available. | scaffold_6 | - | View |
| PPE_006G19340 | No description available. | scaffold_6 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST04G022430 | Pentatricopeptide repeat protein 5 (AHRD V1 ***- A7LN87_MAIZE); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr04 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0001G10620 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G36270 | similar to AT4G39620|EMB2453 (embryo defective 2453) | ch7-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV07G06120 | name=GSVIVG01022204001; | chr7 | - | View |