Anchorpoints
- Gene id
- AT5G64740
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G39350 | Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase A2 cellulose synthase A2 (CESA2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A9 (TAIR:AT2G21770.1); Has 3166 Blast hits to 2799 proteins in 618 species: Archae - 10; Bacteria - 1096; Metazoa - 3; Fungi - 18; Plants - 1940; Viruses - 5; Other Eukaryotes - 94 (source: NCBI BLink). | 4 | + | View |
AT5G09870 | cellulose synthase 5 (CESA5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 6 (TAIR:AT5G64740.1); Has 3218 Blast hits to 2905 proteins in 647 species: Archae - 9; Bacteria - 1207; Metazoa - 1; Fungi - 23; Plants - 1882; Viruses - 5; Other Eukaryotes - 91 (source: NCBI BLink). cellulose synthase 5 Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose. | 5 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G09530 | No description available. | scaffold_6 | + | View |
AL7G01290 | No description available. | scaffold_7 | + | View |
AL8G31490 | No description available. | scaffold_8 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G40680 | No description available. | A02 | + | View |
BR06G22700 | No description available. | A06 | + | View |
BR03G03760 | No description available. | A03 | + | View |
BR09G07000 | No description available. | A09 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G08230 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G10610 | No description available. | CM3.5_scaffold00007 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G08110 | No description available. | scaffold_6 | + | View |
CRU_007G01150 | No description available. | scaffold_7 | + | View |
CRU_008G24800 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G01080 | No description available. | scaffold00002 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G02300 | No description available. | scaffold_9 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G20640 | Cellulose synthase A catalytic subunit 2 [UDP-forming] (AtCesA2) (putative) | LG1 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G32100 | No description available. | Gm05 | - | View |
GM08G15380 | No description available. | Gm08 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G25510 | No description available. | Chr09 | + | View |
GR03G04930 | No description available. | Chr03 | - | View |
GR02G15030 | No description available. | Chr02 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G092590 | cellulose synthase-like protein | chr8 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G33240 | No description available. | scaffold_4 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G08750 | No description available. | Chr05 | - | View |
PT07G07650 | No description available. | Chr07 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G071650 | Cellulose synthase (AHRD V1 **** B9GTH4_POPTR)%3B contains Interpro domain(s) IPR005150 Cellulose synthase | ch04 | + | View |
SL11G005560 | Cellulose synthase (AHRD V1 ***- B9GTH4_POPTR)%3B contains Interpro domain(s) IPR005150 Cellulose synthase | ch11 | + | View |
SL12G056580 | Cellulose synthase (AHRD V1 ***- B9GTH4_POPTR)%3B contains Interpro domain(s) IPR005150 Cellulose synthase | ch12 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G006030 | Cellulose synthase (AHRD V1 **** Q6YBV3_POPTM); contains Interpro domain(s) IPR005150 Cellulose synthase | chr11 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G11380 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G33540 | similar to AT5G09870|CESA5 (CELLULOSE SYNTHASE 5) | ch6-6 | - | View |
TP2G27810 | similar to AT5G64740|CESA6 (CELLULOSE SYNTHASE 6) | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G06810 | name=GSVIVG01022285001; | chr7 | - | View |