Anchorpoints
- Gene id
- AT4G27310
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G54470 | B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G27310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). B-box type zinc finger family protein | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G19730 | No description available. | scaffold_8 | - | View |
AL7G14700 | No description available. | scaffold_7 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G17570 | No description available. | A01 | + | View |
BR03G49600 | No description available. | A03 | + | View |
BR02G15100 | No description available. | A02 | + | View |
BR10G08030 | No description available. | A10 | - | View |
BR08G17120 | No description available. | A08 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G42850 | No description available. | Bvchr4_un.sca004 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G16440 | No description available. | Chr5 | + | View |
CL01G22540 | No description available. | Chr1 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G03620 | No description available. | CM3.5_scaffold00007 | - | View |
CM00032G01160 | No description available. | CM3.5_scaffold00032 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G12780 | No description available. | scaffold_7 | - | View |
CRU_008G14400 | No description available. | scaffold_8 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00012G00960 | No description available. | scaffold00012 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G08480 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G27560 | Zinc finger protein CONSTANS-LIKE 3 (probable) | LG3 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM15G07140 | No description available. | Gm15 | + | View |
GM13G32160 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G43000 | No description available. | Chr09 | + | View |
GR02G07770 | No description available. | Chr02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD05G002850 | No description available. | 5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G18460 | No description available. | scaffold_4 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G41470 | No description available. | Chr01 | + | View |
PT11G12540 | No description available. | Chr11 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30027G00460 | No description available. | 30027 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G053140 | CONSTANS-like zinc finger protein (AHRD V1 *-*- D0EP07_SOYBN)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-box | ch07 | + | View |
SL10G006750 | CONSTANS-like zinc finger protein (AHRD V1 *--- D0EP04_SOYBN)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-box | ch10 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST10G006960 | CONSTANS-like zinc finger protein (AHRD V1 *--- D0EP07_SOYBN); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr10 | - | View |
ST02G022400 | CONSTANS-like zinc finger protein (AHRD V1 *--- D0EP07_SOYBN); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr02 | - | View |
ST07G020650 | CONSTANS-like zinc finger protein (AHRD V1 *-*- D0EP07_SOYBN); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr07 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G16110 | No description available. | scaffold_2 | + | View |
TC0006G19720 | No description available. | scaffold_6 | - | View |
TC0007G06400 | No description available. | scaffold_7 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G16440 | similar to AT5G54470|zinc finger (B-box type) family protein | ch6-6 | - | View |
TP7G25230 | similar to AT4G27310|zinc finger (B-box type) family protein | ch7-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV19G03950 | name=GSVIVG01014471001; | chr19 | - | View |