Anchorpoints

Gene id
AT4G23570
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G11260SGT1B; FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Tetratricopeptide-like helical (InterPro:IPR011990), SGS (InterPro:IPR007699), Tetratricopeptide repeat-containing (InterPro:IPR013026), HSP20-like chaperone (InterPro:IPR008978), Tetratricopeptide repeat (InterPro:IPR019734), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G23570.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). phosphatase-related Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G18610No description available.scaffold_7-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G25890No description available.A03-View
BR03G47230No description available.A03+View
BR01G13550No description available.A01+View
BR08G10090No description available.A08+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G16690No description available.scaffold_7-View
CRU_006G28980No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00097G00390No description available.scaffold00097+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G14540No description available.scaffold_4-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G43150No description available.Gm01+View
GM11G02341No description available.Gm11-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G27340No description available.Chr08-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05280G00750No description available.scaffold05280+View
ME06089G00620No description available.scaffold06089-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G009930SGT1-2chr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G28960No description available.scaffold_2+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G04480No description available.30190+View
RC30169G03480No description available.30169-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G21490similar to AT4G23570|SGT1Ach7-4+View
TP6G06190similar to AT4G11260|SGT1Bch6-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G03730name=GSVIVG01019422001;chr2+View


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Gene id
Species
Description
Chromosome
Strand