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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AT4G17870
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G46790 | Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYR1-like 1 PYR1-like 1 (PYL1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G17870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL8G01380 | No description available. | scaffold_8 | + | View |
| AL7G25030 | No description available. | scaffold_7 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G44180 | No description available. | A03 | + | View |
| BR08G11140 | No description available. | A08 | + | View |
| BR01G09080 | No description available. | A01 | + | View |
| BR09G22660 | No description available. | A09 | + | View |
| BR06G36710 | No description available. | A06 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV5G04610 | No description available. | Bvchr5.sca007 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL10G00490 | No description available. | Chr10 | + | View |
| CL09G11580 | No description available. | Chr9 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM01596G01210 | No description available. | CM3.5_scaffold01596 | + | View |
| CM00021G01610 | No description available. | CM3.5_scaffold00021 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_008G01130 | No description available. | scaffold_8 | + | View |
| CRU_007G22420 | No description available. | scaffold_7 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0004G18080 | No description available. | scaffold_4 | - | View |
| EG0005G02540 | No description available. | scaffold_5 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM01G12970 | No description available. | Gm01 | - | View |
| GM01G02290 | No description available. | Gm01 | - | View |
| GM09G33700 | No description available. | Gm09 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR07G03180 | No description available. | Chr07 | + | View |
| GR08G22650 | No description available. | Chr08 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_005G04040 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G14250 | No description available. | Chr01 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29827G00060 | No description available. | 29827 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G076960 | Abscisic acid receptor PYR1 (AHRD V1 **-- PYR1_ARATH)%3B contains Interpro domain(s) IPR019587 Polyketide cyclase/dehydrase | ch08 | - | View |
| SL06G061180 | Abscisic acid receptor PYR1 (AHRD V1 **-- PYR1_ARATH)%3B contains Interpro domain(s) IPR019587 Polyketide cyclase/dehydrase | ch06 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST06G021350 | Abscisic acid receptor PYR1 (AHRD V1 **-- PYR1_ARATH); contains Interpro domain(s) IPR019587 Polyketide cyclase/dehydrase | chr06 | + | View |
| ST08G021300 | Abscisic acid receptor PYR1 (AHRD V1 **-* PYR1_ARATH); contains Interpro domain(s) IPR019587 Polyketide cyclase/dehydrase | chr08 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0003G22680 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G11600 | No description available. | ch2-4 | - | View |
| TP7G16250 | No description available. | ch7-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV02G02300 | name=GSVIVG01013161001; | chr2 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G22200 | cyclase/dehydrase family protein | 1 | - | View |