PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AT3G57830
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G43020	Leucine-rich repeat protein kinase family protein Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G67200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).	5	-	View
AT2G42290	Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G57830.1); Has 122940 Blast hits to 81081 proteins in 2563 species: Archae - 92; Bacteria - 8297; Metazoa - 26465; Fungi - 4678; Plants - 71242; Viruses - 178; Other Eukaryotes - 11988 (source: NCBI BLink). Leucine-rich repeat protein kinase family protein	2	-	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL4G29480	No description available.	scaffold_4	-	View
AL5G28350	No description available.	scaffold_5	+	View

Amborella trichopoda

Gene id	Description	Chromosome	Strand	Multiplicon
ATR_00022G03030	No description available.	scaffold00022	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR09G38290	No description available.	A09	+	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV3G15860	No description available.	Bvchr3.sca009	-	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL04G01140	No description available.	Chr4	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00085G01170	No description available.	supercontig_85	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_004G23780	No description available.	scaffold_4	-	View
CRU_005G23310	No description available.	scaffold_5	+	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00092G00240	No description available.	scaffold00092	+	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0001G20320	No description available.	scaffold_1	+	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV6G44990	Probable inactive receptor kinase At5g58300, Precursor	LG6	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM19G32590	No description available.	Gm19	+	View
GM03G29740	No description available.	Gm03	+	View
GM02G29610	No description available.	Gm02	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR02G22900	No description available.	Chr02	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD14G005430	No description available.	14	-	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME03602G00470	No description available.	scaffold03602	-	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT1G052425	LRR receptor-like kinase	chr1	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS08G39590	inactive receptor kinase At2g26730 precursor, putative, expressed	8	+	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_007G08420	No description available.	scaffold_7	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT06G05750	No description available.	Chr06	+	View
PT16G05080	No description available.	Chr16	-	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0005G16750	No description available.	scaffold_5	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP5G04870	similar to AT3G57830\|leucine-rich repeat transmembrane protein kinase, putative	ch5-1	-	View
TP4G24460	similar to AT2G42290\|leucine-rich repeat family protein	ch4-6	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV08G08020	name=GSVIVG01033355001;	chr8	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM01G32460	PAN1	1	+	View