Anchorpoints

Gene id
AT3G50890
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G18350homeobox protein 24 homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G39410No description available.scaffold_3-View
AL5G20490No description available.scaffold_5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G32620No description available.A09+View
BR03G41720No description available.A03+View
BR09G09410No description available.A09-View
BR07G01940No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G19730No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G08650No description available.CM3.5_scaffold00007+View
CM00027G03360No description available.CM3.5_scaffold00027-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G01180No description available.supercontig_6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G16150No description available.scaffold_5+View
CRU_003G31260No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G03650No description available.scaffold00006+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G12700No description available.scaffold_6+View
EG0009G20590No description available.scaffold_9-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G07360No description available.Gm11+View
GM02G06270No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G01410No description available.Chr03-View
GR07G05050No description available.Chr07-View
GR02G12750No description available.Chr02-View
GR07G20250No description available.Chr07-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G17660No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G02410No description available.Chr07-View
PT05G12250No description available.Chr05-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085160Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028310Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G03230No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G11330similar to AT3G50890|AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)ch5-1-View
TP3G31750similar to AT2G18350|AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24)ch3-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G02080name=GSVIVG01018947001;chr4+View


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Gene id
Species
Description
Chromosome
Strand