Anchorpoints
- Gene id
- AT2G40610
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G05290 | expansin A2 Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A2 (EXPA2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A8 (TAIR:AT2G40610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G27520 | No description available. | scaffold_4 | - | View |
AL6G04860 | No description available. | scaffold_6 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00077G00360 | No description available. | scaffold00077 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G24330 | No description available. | A04 | - | View |
BR05G01730 | No description available. | A05 | - | View |
BR10G23680 | No description available. | A10 | + | View |
BR03G20420 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G11930 | No description available. | Bvchr2.sca018 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G04990 | No description available. | Chr7 | - | View |
CL11G13130 | No description available. | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00041G01180 | No description available. | CM3.5_scaffold00041 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G00660 | No description available. | supercontig_19 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G04110 | No description available. | scaffold_6 | + | View |
CRU_004G22160 | No description available. | scaffold_4 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00233G00270 | No description available. | scaffold00233 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G01050 | No description available. | scaffold_10 | + | View |
EG0007G25070 | No description available. | scaffold_7 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G31080 | Expansin-A8 (AtEXPA8), Precursor (putative) | LG7 | - | View |
FV3G31460 | Expansin-A10 (AtEXPA10), Precursor (similar to) | LG3 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM14G38430 | No description available. | Gm14 | - | View |
GM06G14850 | No description available. | Gm06 | + | View |
GM18G06063 | No description available. | Gm18 | + | View |
GM04G40000 | No description available. | Gm04 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G29350 | No description available. | Chr09 | - | View |
GR13G00700 | No description available. | Chr13 | + | View |
GR11G20910 | No description available. | Chr11 | - | View |
GR12G01440 | No description available. | Chr12 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G019420 | No description available. | 12 | - | View |
MD04G002830 | No description available. | 4 | - | View |
MD04G013980 | No description available. | 4 | - | View |
MD01G015710 | No description available. | 1 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08315G00110 | No description available. | scaffold08315 | - | View |
ME00926G00320 | No description available. | scaffold00926 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G466760 | expansin A10 | chr3 | - | View |
MT3G094040 | expansin A10 | chr3 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS05G39990 | expansin precursor, putative, expressed Expansin-A4 | 5 | - | View |
OS01G60770 | Expansin-A2 expansin precursor, putative, expressed | 1 | + | View |
OS03G21820 | Expansin-A6 expansin precursor, putative, expressed | 3 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G25280 | No description available. | scaffold_2 | - | View |
PPE_006G03170 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT19G05750 | No description available. | Chr19 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29729G00940 | No description available. | 29729 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G049050 | Expansin (AHRD V1 ***- O82625_SOLLC)%3B contains Interpro domain(s) IPR007112 Expansin 45%2C endoglucanase-like IPR007117 Pollen allergen/expansin%2C C-terminal | ch06 | + | View |
SL05G052250 | Expansin 2 (AHRD V1 ***- C0LU46_CITSI)%3B contains Interpro domain(s) IPR002963 Expansin | ch05 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST05G024880 | Expansin (AHRD V1 ***- B7U8J4_DIOKA); contains Interpro domain(s) IPR002963 Expansin | chr05 | + | View |
ST06G013030 | Expansin (AHRD V1 ***- O82625_SOLLC); contains Interpro domain(s) IPR002963 Expansin | chr06 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0010G17950 | No description available. | scaffold_10r | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G37530 | similar to AT5G05290|ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2) | ch6-6 | - | View |
TP4G22940 | similar to AT2G40610|ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G00480 | name=GSVIVG01024572001; | chr6 | - | View |
VV13G09290 | name=GSVIVG01032681001; | chr13 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G28280 | alpha expansin1;alpha expansin1 | 3 | - | View |