Anchorpoints

Gene id
AT2G40610
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G05290expansin A2 Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A2 (EXPA2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A8 (TAIR:AT2G40610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G27520No description available.scaffold_4-View
AL6G04860No description available.scaffold_6+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00077G00360No description available.scaffold00077+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G24330No description available.A04-View
BR05G01730No description available.A05-View
BR10G23680No description available.A10+View
BR03G20420No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G11930No description available.Bvchr2.sca018+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G04990No description available.Chr7-View
CL11G13130No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00041G01180No description available.CM3.5_scaffold00041-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G00660No description available.supercontig_19+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G04110No description available.scaffold_6+View
CRU_004G22160No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00233G00270No description available.scaffold00233-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G01050No description available.scaffold_10+View
EG0007G25070No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G31080Expansin-A8 (AtEXPA8), Precursor (putative)LG7-View
FV3G31460Expansin-A10 (AtEXPA10), Precursor (similar to)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G38430No description available.Gm14-View
GM06G14850No description available.Gm06+View
GM18G06063No description available.Gm18+View
GM04G40000No description available.Gm04-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G29350No description available.Chr09-View
GR13G00700No description available.Chr13+View
GR11G20910No description available.Chr11-View
GR12G01440No description available.Chr12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G019420No description available.12-View
MD04G002830No description available.4-View
MD04G013980No description available.4-View
MD01G015710No description available.1-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08315G00110No description available.scaffold08315-View
ME00926G00320No description available.scaffold00926-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G466760expansin A10chr3-View
MT3G094040expansin A10chr3+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G39990expansin precursor, putative, expressed Expansin-A45-View
OS01G60770Expansin-A2 expansin precursor, putative, expressed1+View
OS03G21820Expansin-A6 expansin precursor, putative, expressed3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G25280No description available.scaffold_2-View
PPE_006G03170No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT19G05750No description available.Chr19-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29729G00940No description available.29729-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G049050Expansin (AHRD V1 ***- O82625_SOLLC)%3B contains Interpro domain(s) IPR007112 Expansin 45%2C endoglucanase-like IPR007117 Pollen allergen/expansin%2C C-terminalch06+View
SL05G052250Expansin 2 (AHRD V1 ***- C0LU46_CITSI)%3B contains Interpro domain(s) IPR002963 Expansinch05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G024880Expansin (AHRD V1 ***- B7U8J4_DIOKA); contains Interpro domain(s) IPR002963 Expansinchr05+View
ST06G013030Expansin (AHRD V1 ***- O82625_SOLLC); contains Interpro domain(s) IPR002963 Expansinchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G17950No description available.scaffold_10r+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G37530similar to AT5G05290|ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)ch6-6-View
TP4G22940similar to AT2G40610|ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G00480name=GSVIVG01024572001;chr6-View
VV13G09290name=GSVIVG01032681001;chr13+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G28280alpha expansin1;alpha expansin13-View


Download

Gene id
Species
Description
Chromosome
Strand