Anchorpoints

Gene id
AT2G18600
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G36800RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). RUB1 conjugating enzyme 1 RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G39760No description available.scaffold_3-View
AL7G03990No description available.scaffold_7+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G09860No description available.A09-View
BR01G01940No description available.A01+View
BR08G18780No description available.A08-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G05510No description available.Chr2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00062G01080No description available.supercontig_62+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G03270No description available.scaffold_7+View
CRU_003G31640No description available.scaffold_3-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G10710No description available.scaffold_8+View
EG0009G09930No description available.scaffold_9+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G51340NEDD8-conjugating enzyme Ubc12 (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G38470No description available.Gm01-View
GM11G06830No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G05120No description available.Chr07-View
GR07G20630No description available.Chr07-View
GR08G06970No description available.Chr08-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G019480ubiquitin-conjugating enzymechr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G39060No description available.scaffold_1-View
PPE_007G17030No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G03090No description available.Chr07-View
PT09G11300No description available.Chr09+View
PT05G12650No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G03540No description available.30170+View
RC29646G00080No description available.29646+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085690Ubiquitin-conjugating enzyme E2 4 (AHRD V1 ***- UBC4_SCHPO)%3B contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12ch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028810Ubiquitin-conjugating enzyme (AHRD V1 ***- E9CHE9_9EUKA); contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12chr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G03940No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G32100similar to AT2G18600|RUB1-conjugating enzyme, putativech3-6-View
TP7G34460similar to AT4G36800|RCE1 (RUB1 CONJUGATING ENZYME 1)ch7-6-View


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Gene id
Species
Description
Chromosome
Strand