Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G76180
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G20440 | Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant. cold-regulated 47 (COR47); CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT1G20450.1); Has 14264 Blast hits to 8754 proteins in 735 species: Archae - 48; Bacteria - 976; Metazoa - 4799; Fungi - 1094; Plants - 2502; Viruses - 117; Other Eukaryotes - 4728 (source: NCBI BLink). cold-regulated 47 | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G21590 | No description available. | scaffold_1 | - | View |
| AL2G25070 | No description available. | scaffold_2 | - | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00001G02920 | No description available. | scaffold00001 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G23610 | No description available. | A02 | - | View |
| BR07G19730 | No description available. | A07 | + | View |
| BR07G10410 | No description available. | A07 | + | View |
| BR07G31390 | No description available. | A07 | - | View |
| BR06G14750 | No description available. | A06 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV9G01430 | No description available. | Bvchr9.sca025 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL08G09370 | No description available. | Chr8 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00096G00580 | No description available. | CM3.5_scaffold00096 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00026G02260 | No description available. | supercontig_26 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G19100 | No description available. | scaffold_1 | - | View |
| CRU_002G21770 | No description available. | scaffold_2 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00023G01390 | No description available. | scaffold00023 | + | View |
| CS00002G06340 | No description available. | scaffold00002 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0006G14020 | No description available. | scaffold_6 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G11220 | Corepressor interacting with RBPJ 1 (similar to) | LG2 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR02G11960 | No description available. | Chr02 | + | View |
| GR09G18950 | No description available. | Chr09 | + | View |
| GR08G03870 | No description available. | Chr08 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD09G019260 | No description available. | 9 | + | View |
| MD12G014220 | No description available. | 12 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06708G00020 | No description available. | scaffold06708 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_008G18990 | No description available. | scaffold_8 | - | View |
| PPE_001G36500 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G24810 | No description available. | Chr05 | - | View |
| PT02G01320 | No description available. | Chr02 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30170G06440 | No description available. | 30170 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL04G082200 | Dehydrin (AHRD V1 *-*- Q1A4H3_COFCA)%3B contains Interpro domain(s) IPR000167 Dehydrin | ch04 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST04G035610 | Dehydrin (Fragment) (AHRD V1 ***- E5F3B1_9SOLN); contains Interpro domain(s) IPR000167 Dehydrin | chr04 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0008G05340 | No description available. | scaffold_8 | - | View |
| TC0002G04920 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G18160 | similar to AT1G20450|ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10) | ch1-1 | - | View |
| TP5G31320 | similar to AT1G76180|ERD14 (EARLY RESPONSE TO DEHYDRATION 14) | ch5-7 | - | View |