Anchorpoints
- Gene id
- AT1G69600
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G28917 | mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). mini zinc finger 2 | 3 | + | View |
AT5G15210 | homeobox protein 30 homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family. | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G08360 | No description available. | scaffold_5 | + | View |
AL2G17850 | No description available. | scaffold_2 | + | View |
AL6G15040 | No description available. | scaffold_6 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00010G04510 | No description available. | scaffold00010 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G19910 | No description available. | A02 | + | View |
BR07G26380 | No description available. | A07 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G02700 | No description available. | Bvchr6.sca028 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G13140 | No description available. | Chr10 | - | View |
CL06G16780 | No description available. | Chr6 | - | View |
CL04G12060 | No description available. | Chr4 | - | View |
CL05G25260 | No description available. | Chr5 | + | View |
CL09G18710 | No description available. | Chr9 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00016G04190 | No description available. | CM3.5_scaffold00016 | - | View |
CM00001G00710 | No description available. | CM3.5_scaffold00001 | + | View |
CM00030G00930 | No description available. | CM3.5_scaffold00030 | + | View |
CM00051G00280 | No description available. | CM3.5_scaffold00051 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G15310 | No description available. | scaffold_2 | + | View |
CRU_006G13070 | No description available. | scaffold_6 | - | View |
CRU_005G06870 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G04300 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G16300 | No description available. | scaffold_9 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G05550 | ZF-HD homeobox protein At4g24660 (AtHB-22) (similar to) | scf0513158 | + | View |
FV5G13300 | ZF-HD homeobox protein At4g24660 (AtHB-22) (similar to) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G10830 | No description available. | Gm17 | + | View |
GM20G04880 | No description available. | Gm20 | + | View |
GM02G11950 | No description available. | Gm02 | - | View |
GM06G20810 | No description available. | Gm06 | + | View |
GM05G01060 | No description available. | Gm05 | - | View |
GM07G35760 | No description available. | Gm07 | + | View |
GM04G33640 | No description available. | Gm04 | - | View |
GM09G37300 | No description available. | Gm09 | + | View |
GM13G05380 | No description available. | Gm13 | + | View |
GM19G02610 | No description available. | Gm19 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR13G08550 | No description available. | Chr13 | - | View |
GR12G05430 | No description available. | Chr12 | + | View |
GR07G03730 | No description available. | Chr07 | + | View |
GR06G01720 | No description available. | Chr06 | + | View |
GR05G14140 | No description available. | Chr05 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G004730 | No description available. | 13 | + | View |
MD09G003650 | No description available. | 9 | + | View |
MD16G003850 | No description available. | 16 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11581G01500 | No description available. | scaffold11581 | + | View |
ME03834G00050 | No description available. | scaffold03834 | + | View |
ME12794G02160 | No description available. | scaffold12794 | + | View |
ME11495G00260 | No description available. | scaffold11495 | + | View |
ME11341G00710 | No description available. | scaffold11341 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G28600 | No description available. | scaffold_1 | - | View |
PPE_003G24670 | No description available. | scaffold_3 | + | View |
PPE_005G19810 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G08270 | No description available. | Chr17 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29813G00370 | No description available. | 29813 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G007580 | Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation region | ch05 | - | View |
SL03G116070 | Zinc finger-homeodomain protein 3 (Fragment) (AHRD V1 **-- B0LK14_SARHE)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation region | ch03 | - | View |
SL02G067310 | Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation region | ch02 | + | View |
SL02G087970 | Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation region | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST05G010300 | Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation region | chr05 | + | View |
ST02G013170 | Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation region | chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G34470 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G28860 | similar to AT5G15210|ATHB30 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 30) | ch6-6 | + | View |
TP5G24720 | similar to AT1G69600|ZFHD1 (ZINC FINGER HOMEODOMAIN 1) | ch5-6 | + | View |
TP2G17540 | similar to AT3G28917|MIF2 (MINI ZINC FINGER 2) | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G02170 | name=GSVIVG01011413001; | chr14 | + | View |
VV01G12070 | name=GSVIVG01019981001; | chr1 | + | View |